Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Chrna5-201ENSMUST00000093844 1877 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Gm18313-201ENSMUST00000221036 1784 ntBASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Bbs9-211ENSMUST00000150395 3425 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Cfl2-201ENSMUST00000078124 2940 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Ubap2l-208ENSMUST00000196843 3975 ntTSL 5 BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Gm17142-201ENSMUST00000164933 645 ntBASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Gm23187-201ENSMUST00000175746 86 ntBASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Gm9167-201ENSMUST00000182469 962 ntBASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Gm38022-201ENSMUST00000191762 403 ntBASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Gm9226-201ENSMUST00000188352 3489 ntBASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Gm21152-201ENSMUST00000190271 3483 ntBASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Gm11548-201ENSMUST00000140203 2199 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Copa-206ENSMUST00000135192 4622 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Gm37410-201ENSMUST00000193623 3039 ntBASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Gm44669-201ENSMUST00000207774 1969 ntBASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Gm13114-201ENSMUST00000117605 106 ntBASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Calr-ps-201ENSMUST00000121776 485 ntBASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Gm24236-201ENSMUST00000157794 134 ntBASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Gm43141-201ENSMUST00000199695 274 ntBASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Gm30694-201ENSMUST00000209278 1230 ntBASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Gm25682-201ENSMUST00000083942 164 ntBASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Gm10205-201ENSMUST00000087431 234 ntBASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Olfr1331-201ENSMUST00000094831 954 ntAPPRIS P2 BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Vmn1r40-202ENSMUST00000226925 3011 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Gm44684-201ENSMUST00000205388 2926 ntTSL 5 BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Grk3-201ENSMUST00000065167 6533 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Gm43589-201ENSMUST00000199400 1523 ntBASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Sema4d-202ENSMUST00000110039 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Dclk1-212ENSMUST00000199585 5196 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Gm22596-201ENSMUST00000157601 316 ntBASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Gm24216-201ENSMUST00000158259 117 ntBASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Mir5107-201ENSMUST00000175586 88 ntBASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Gm18797-201ENSMUST00000190809 1174 ntBASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Gm45746-201ENSMUST00000212623 2447 ntBASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Oasl2-201ENSMUST00000031542 3123 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Kif1b-201ENSMUST00000030806 6991 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Gm15011-201ENSMUST00000117724 1480 ntBASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col6a3E9PWQ3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Col6a3E9PWQ3 Chrna1-201ENSMUST00000028515 4386 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col6a3E9PWQ3 Gm15601-201ENSMUST00000122972 4033 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Col6a3E9PWQ3 Coq8a-217ENSMUST00000170472 3928 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col6a3E9PWQ3 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Col6a3E9PWQ3 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Col6a3E9PWQ3 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC6.93□□□□□ -1.3
Col6a3E9PWQ3 Gm27219-201ENSMUST00000184633 742 ntBASIC6.93□□□□□ -1.3
Col6a3E9PWQ3 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC6.93□□□□□ -1.3
Col6a3E9PWQ3 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Col6a3E9PWQ3 Gm5692-201ENSMUST00000187254 1057 ntBASIC6.93□□□□□ -1.3
Col6a3E9PWQ3 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.93□□□□□ -1.3
Col6a3E9PWQ3 Gm37272-201ENSMUST00000193401 488 ntBASIC6.93□□□□□ -1.3
Col6a3E9PWQ3 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC6.93□□□□□ -1.3
Col6a3E9PWQ3 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC6.93□□□□□ -1.3
Col6a3E9PWQ3 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.93□□□□□ -1.3
Col6a3E9PWQ3 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Col6a3E9PWQ3 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC6.93□□□□□ -1.3
Col6a3E9PWQ3 Fgf13-202ENSMUST00000119306 2091 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Col6a3E9PWQ3 Gm37069-201ENSMUST00000192742 4142 ntBASIC6.93□□□□□ -1.3
Col6a3E9PWQ3 Etl4-205ENSMUST00000114607 3055 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 135.9 ms