Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 AC164437.5-201ENSMUST00000227235 4414 ntBASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Gm25396-201ENSMUST00000103981 133 ntBASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Gm371-201ENSMUST00000142240 1245 ntBASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Gm7991-201ENSMUST00000168668 591 ntBASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Gm6536-201ENSMUST00000171180 615 ntBASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Gm17973-201ENSMUST00000174509 520 ntBASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Gm22702-201ENSMUST00000175372 69 ntBASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Gm20223-201ENSMUST00000199932 805 ntBASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Gm21048-201ENSMUST00000202470 1166 ntBASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Gm33778-201ENSMUST00000216884 704 ntBASIC8.2□□□□□ -1.1
Smc1aQ9CU62 AC155834.1-201ENSMUST00000220033 498 ntBASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Gm40853-201ENSMUST00000221342 582 ntBASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Gm9255-201ENSMUST00000223225 581 ntBASIC8.2□□□□□ -1.1
Smc1aQ9CU62 AC139323.1-201ENSMUST00000223370 1040 ntBASIC8.2□□□□□ -1.1
Smc1aQ9CU62 AC133598.4-201ENSMUST00000224577 454 ntBASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Gm20900-201ENSMUST00000078729 472 ntBASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Gm44249-201ENSMUST00000204538 1805 ntBASIC8.19□□□□□ -1.1
Smc1aQ9CU62 AC122426.2-201ENSMUST00000216522 2947 ntBASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 CT025535.2-201ENSMUST00000228572 7441 ntBASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Gm15186-201ENSMUST00000119345 563 ntBASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Gm12459-201ENSMUST00000120659 356 ntBASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Gm22342-201ENSMUST00000122647 298 ntBASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Gm24139-201ENSMUST00000122780 288 ntBASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Gm23533-201ENSMUST00000157540 245 ntBASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Gm8715-201ENSMUST00000162728 531 ntBASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Gm26505-201ENSMUST00000176208 166 ntBASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Gm20690-201ENSMUST00000177341 315 ntBASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Gm37724-201ENSMUST00000195240 1221 ntBASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Gm43287-201ENSMUST00000197747 600 ntBASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Gm8575-201ENSMUST00000210262 521 ntBASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Gm6667-201ENSMUST00000217169 564 ntBASIC8.19□□□□□ -1.1
Smc1aQ9CU62 AC166822.1-201ENSMUST00000227667 636 ntBASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Mir138-2-201ENSMUST00000083578 71 ntBASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 AC124421.1-201ENSMUST00000219114 4154 ntBASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Gm43533-201ENSMUST00000202933 2936 ntBASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms