Protein–RNA interactions for Protein: P55194

Sh3bp1, SH3 domain-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3bp1P55194 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sh3bp1P55194 Gm42678-201ENSMUST00000197163 2221 ntBASIC8.23□□□□□ -1.09
Sh3bp1P55194 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Sh3bp1P55194 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Sh3bp1P55194 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Sh3bp1P55194 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Sh3bp1P55194 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Sh3bp1P55194 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Sh3bp1P55194 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Sh3bp1P55194 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC8.22□□□□□ -1.09
Sh3bp1P55194 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Sh3bp1P55194 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Sh3bp1P55194 Gm18878-201ENSMUST00000223071 1443 ntBASIC8.22□□□□□ -1.09
Sh3bp1P55194 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Sh3bp1P55194 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Sh3bp1P55194 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Sh3bp1P55194 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Sh3bp1P55194 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC8.22□□□□□ -1.09
Sh3bp1P55194 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Sh3bp1P55194 Gm12985-201ENSMUST00000118376 183 ntBASIC8.22□□□□□ -1.09
Sh3bp1P55194 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC8.22□□□□□ -1.09
Sh3bp1P55194 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Sh3bp1P55194 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC8.22□□□□□ -1.09
Sh3bp1P55194 Gm23533-201ENSMUST00000157540 245 ntBASIC8.22□□□□□ -1.09
Sh3bp1P55194 Scarna17-201ENSMUST00000158064 79 ntBASIC8.22□□□□□ -1.09
Sh3bp1P55194 Gm23757-201ENSMUST00000158353 100 ntBASIC8.22□□□□□ -1.09
Sh3bp1P55194 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC8.22□□□□□ -1.09
Sh3bp1P55194 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC8.22□□□□□ -1.09
Sh3bp1P55194 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Sh3bp1P55194 Gm24576-201ENSMUST00000175508 248 ntBASIC8.22□□□□□ -1.09
Sh3bp1P55194 Gm8502-201ENSMUST00000185708 901 ntBASIC8.22□□□□□ -1.09
Sh3bp1P55194 Gm21147-201ENSMUST00000186046 913 ntBASIC8.22□□□□□ -1.09
Sh3bp1P55194 Gm5920-201ENSMUST00000187390 853 ntBASIC8.22□□□□□ -1.09
Sh3bp1P55194 Gm42965-201ENSMUST00000201254 250 ntBASIC8.22□□□□□ -1.09
Sh3bp1P55194 Gm30694-201ENSMUST00000209278 1230 ntBASIC8.22□□□□□ -1.09
Sh3bp1P55194 Gm6991-201ENSMUST00000218475 1178 ntBASIC8.22□□□□□ -1.09
Sh3bp1P55194 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC8.22□□□□□ -1.09
Sh3bp1P55194 AC163667.2-201ENSMUST00000223769 791 ntBASIC8.22□□□□□ -1.09
Sh3bp1P55194 CT009733.1-202ENSMUST00000224941 441 ntBASIC8.22□□□□□ -1.09
Sh3bp1P55194 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Sh3bp1P55194 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Sh3bp1P55194 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Sh3bp1P55194 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Sh3bp1P55194 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Sh3bp1P55194 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Sh3bp1P55194 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Sh3bp1P55194 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC8.22□□□□□ -1.09
Sh3bp1P55194 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Sh3bp1P55194 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Sh3bp1P55194 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Sh3bp1P55194 AC158686.1-201ENSMUST00000218068 2332 ntBASIC8.21□□□□□ -1.09
Sh3bp1P55194 Gm16427-201ENSMUST00000179091 1449 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Sh3bp1P55194 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Sh3bp1P55194 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Sh3bp1P55194 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Sh3bp1P55194 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Sh3bp1P55194 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Sh3bp1P55194 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Sh3bp1P55194 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Sh3bp1P55194 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Sh3bp1P55194 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC8.21□□□□□ -1.1
Sh3bp1P55194 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.1
Sh3bp1P55194 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Sh3bp1P55194 Gm12219-201ENSMUST00000119198 443 ntBASIC8.21□□□□□ -1.1
Sh3bp1P55194 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Sh3bp1P55194 Gm12692-201ENSMUST00000121092 546 ntBASIC8.21□□□□□ -1.1
Sh3bp1P55194 Gm14749-201ENSMUST00000121269 333 ntBASIC8.21□□□□□ -1.1
Sh3bp1P55194 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC8.21□□□□□ -1.1
Sh3bp1P55194 Gm23027-201ENSMUST00000158771 158 ntBASIC8.21□□□□□ -1.1
Sh3bp1P55194 Gm5698-201ENSMUST00000178317 724 ntBASIC8.21□□□□□ -1.1
Sh3bp1P55194 Gm5973-201ENSMUST00000178542 496 ntBASIC8.21□□□□□ -1.1
Sh3bp1P55194 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC8.21□□□□□ -1.1
Sh3bp1P55194 Gm6799-201ENSMUST00000186919 573 ntBASIC8.21□□□□□ -1.1
Sh3bp1P55194 Gm31406-201ENSMUST00000192297 671 ntTSL 2 BASIC8.21□□□□□ -1.1
Sh3bp1P55194 Gm37339-201ENSMUST00000194142 392 ntBASIC8.21□□□□□ -1.1
Sh3bp1P55194 Gm7879-202ENSMUST00000200338 635 ntTSL 5 BASIC8.21□□□□□ -1.1
Sh3bp1P55194 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Sh3bp1P55194 Klra13-ps-203ENSMUST00000204367 850 ntBASIC8.21□□□□□ -1.1
Sh3bp1P55194 Olfr1422-ps1-201ENSMUST00000208076 743 ntBASIC8.21□□□□□ -1.1
Sh3bp1P55194 AC153561.1-201ENSMUST00000215943 469 ntBASIC8.21□□□□□ -1.1
Sh3bp1P55194 Gm9289-201ENSMUST00000221269 606 ntBASIC8.21□□□□□ -1.1
Sh3bp1P55194 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC8.21□□□□□ -1.1
Sh3bp1P55194 AC131710.2-201ENSMUST00000226773 683 ntBASIC8.21□□□□□ -1.1
Sh3bp1P55194 AC154806.1-202ENSMUST00000227949 885 ntBASIC8.21□□□□□ -1.1
Sh3bp1P55194 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Sh3bp1P55194 Glipr1-201ENSMUST00000074805 1081 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Sh3bp1P55194 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC8.21□□□□□ -1.1
Sh3bp1P55194 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Sh3bp1P55194 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Sh3bp1P55194 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Sh3bp1P55194 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Sh3bp1P55194 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Sh3bp1P55194 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Sh3bp1P55194 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC8.21□□□□□ -1.1
Sh3bp1P55194 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Sh3bp1P55194 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Sh3bp1P55194 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC8.2□□□□□ -1.1
Sh3bp1P55194 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Sh3bp1P55194 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Sh3bp1P55194 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms