Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NcanP55066 Gm14891-201ENSMUST00000117378 596 ntBASIC7.82□□□□□ -1.16
NcanP55066 Trav8-2-201ENSMUST00000130122 337 ntBASIC7.82□□□□□ -1.16
NcanP55066 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC7.82□□□□□ -1.16
NcanP55066 Gm23756-201ENSMUST00000157582 114 ntBASIC7.82□□□□□ -1.16
NcanP55066 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC7.82□□□□□ -1.16
NcanP55066 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC7.82□□□□□ -1.16
NcanP55066 Gm26528-201ENSMUST00000181965 283 ntBASIC7.82□□□□□ -1.16
NcanP55066 Gm8581-201ENSMUST00000188636 890 ntBASIC7.82□□□□□ -1.16
NcanP55066 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NcanP55066 Gm10416-201ENSMUST00000197379 645 ntBASIC7.82□□□□□ -1.16
NcanP55066 Creb5-202ENSMUST00000203487 2648 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
NcanP55066 Add2-209ENSMUST00000204059 8182 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
NcanP55066 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC7.82□□□□□ -1.16
NcanP55066 Gm19324-201ENSMUST00000213229 1169 ntBASIC7.82□□□□□ -1.16
NcanP55066 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
NcanP55066 AC153870.1-201ENSMUST00000219599 560 ntBASIC7.82□□□□□ -1.16
NcanP55066 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC7.82□□□□□ -1.16
NcanP55066 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC7.82□□□□□ -1.16
NcanP55066 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC7.82□□□□□ -1.16
NcanP55066 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NcanP55066 CT009515.3-201ENSMUST00000226509 671 ntBASIC7.82□□□□□ -1.16
NcanP55066 AC156790.1-201ENSMUST00000226572 559 ntBASIC7.82□□□□□ -1.16
NcanP55066 Gucy2c-201ENSMUST00000032338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
NcanP55066 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NcanP55066 Sdr42e1-201ENSMUST00000037955 2867 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NcanP55066 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
NcanP55066 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
NcanP55066 Gm44090-201ENSMUST00000204669 1834 ntBASIC7.82□□□□□ -1.16
NcanP55066 Ebpl-201ENSMUST00000022494 10092 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NcanP55066 AC154828.1-201ENSMUST00000220696 2810 ntBASIC7.82□□□□□ -1.16
NcanP55066 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC7.82□□□□□ -1.16
NcanP55066 Gm21719-202ENSMUST00000189073 1358 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
NcanP55066 Gm28653-201ENSMUST00000185494 5276 ntBASIC7.82□□□□□ -1.16
NcanP55066 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC7.82□□□□□ -1.16
NcanP55066 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NcanP55066 Olfr1378-202ENSMUST00000213259 4324 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
NcanP55066 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NcanP55066 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC7.81□□□□□ -1.16
NcanP55066 Gm11733-201ENSMUST00000092394 2311 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
NcanP55066 Zfp207-208ENSMUST00000188489 2898 ntAPPRIS ALT1 TSL 2 BASIC7.81□□□□□ -1.16
NcanP55066 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NcanP55066 Igsf9b-204ENSMUST00000214357 16144 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
NcanP55066 Lrrc49-203ENSMUST00000114032 2586 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NcanP55066 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC7.81□□□□□ -1.16
NcanP55066 Ppp1r9a-204ENSMUST00000168998 2966 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NcanP55066 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
NcanP55066 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
NcanP55066 Add1-205ENSMUST00000114340 3761 ntAPPRIS P3 TSL 5 BASIC7.81□□□□□ -1.16
NcanP55066 Olfr319-203ENSMUST00000215962 2500 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
NcanP55066 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
NcanP55066 Creb1-202ENSMUST00000087366 8364 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NcanP55066 Tcp10a-204ENSMUST00000138222 1838 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
NcanP55066 Atf6-201ENSMUST00000027974 7246 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NcanP55066 Gm22267-201ENSMUST00000104008 131 ntBASIC7.81□□□□□ -1.16
NcanP55066 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC7.81□□□□□ -1.16
NcanP55066 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
NcanP55066 Gm13622-201ENSMUST00000120658 433 ntBASIC7.81□□□□□ -1.16
NcanP55066 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC7.81□□□□□ -1.16
NcanP55066 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NcanP55066 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
NcanP55066 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NcanP55066 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NcanP55066 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC7.81□□□□□ -1.16
NcanP55066 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC7.81□□□□□ -1.16
NcanP55066 Gm22119-201ENSMUST00000175594 99 ntBASIC7.81□□□□□ -1.16
NcanP55066 Gm23187-201ENSMUST00000175746 86 ntBASIC7.81□□□□□ -1.16
NcanP55066 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC7.81□□□□□ -1.16
NcanP55066 Gm28416-201ENSMUST00000188334 292 ntBASIC7.81□□□□□ -1.16
NcanP55066 Gm43555-201ENSMUST00000196588 310 ntBASIC7.81□□□□□ -1.16
NcanP55066 Gm44342-201ENSMUST00000196874 129 ntBASIC7.81□□□□□ -1.16
NcanP55066 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC7.81□□□□□ -1.16
NcanP55066 Gm44383-201ENSMUST00000198940 129 ntBASIC7.81□□□□□ -1.16
NcanP55066 Gm43794-201ENSMUST00000200971 692 ntBASIC7.81□□□□□ -1.16
NcanP55066 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC7.81□□□□□ -1.16
NcanP55066 Gm8575-201ENSMUST00000210262 521 ntBASIC7.81□□□□□ -1.16
NcanP55066 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC7.81□□□□□ -1.16
NcanP55066 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC7.81□□□□□ -1.16
NcanP55066 Gm5654-201ENSMUST00000217787 475 ntBASIC7.81□□□□□ -1.16
NcanP55066 Gm18631-201ENSMUST00000223125 1043 ntBASIC7.81□□□□□ -1.16
NcanP55066 AV026068-219ENSMUST00000224148 933 ntBASIC7.81□□□□□ -1.16
NcanP55066 AC164294.1-201ENSMUST00000224682 688 ntBASIC7.81□□□□□ -1.16
NcanP55066 Gm5612-201ENSMUST00000053326 375 ntBASIC7.81□□□□□ -1.16
NcanP55066 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
NcanP55066 Olfr519-201ENSMUST00000084752 960 ntBASIC7.81□□□□□ -1.16
NcanP55066 Atp6v1a-202ENSMUST00000114666 4234 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NcanP55066 Pla2g4d-201ENSMUST00000094665 3688 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NcanP55066 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NcanP55066 Wdr11-201ENSMUST00000084519 4550 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NcanP55066 Wwp1-202ENSMUST00000108246 6440 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NcanP55066 Wdr48-208ENSMUST00000217472 2997 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NcanP55066 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NcanP55066 Cndp1-201ENSMUST00000070139 2818 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NcanP55066 Phc3-203ENSMUST00000099163 2808 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NcanP55066 Sptbn1-203ENSMUST00000102838 9107 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NcanP55066 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC7.81□□□□□ -1.16
NcanP55066 Gfpt2-201ENSMUST00000020629 2947 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NcanP55066 Aplnr-201ENSMUST00000057019 3699 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
NcanP55066 Gm37465-201ENSMUST00000192845 3290 ntBASIC7.81□□□□□ -1.16
NcanP55066 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms