Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Cobl-210ENSMUST00000174874 5451 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sox1P53783 Pla2g2c-202ENSMUST00000105808 3448 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Sox1P53783 Cep41-201ENSMUST00000031810 3447 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sox1P53783 Slc2a9-202ENSMUST00000067872 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sox1P53783 4930408K08Rik-201ENSMUST00000195936 1436 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Sox1P53783 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Sox1P53783 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Sox1P53783 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sox1P53783 Nod2-202ENSMUST00000109634 4666 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sox1P53783 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
Sox1P53783 Gm14576-201ENSMUST00000118073 1111 ntBASIC8.07□□□□□ -1.12
Sox1P53783 Gm6654-201ENSMUST00000118950 348 ntBASIC8.07□□□□□ -1.12
Sox1P53783 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC8.07□□□□□ -1.12
Sox1P53783 Gm11371-201ENSMUST00000120294 385 ntBASIC8.07□□□□□ -1.12
Sox1P53783 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC8.07□□□□□ -1.12
Sox1P53783 Gm12970-201ENSMUST00000134911 581 ntTSL 3 BASIC8.07□□□□□ -1.12
Sox1P53783 Gm371-201ENSMUST00000142240 1245 ntBASIC8.07□□□□□ -1.12
Sox1P53783 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC8.07□□□□□ -1.12
Sox1P53783 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Sox1P53783 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Sox1P53783 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC8.07□□□□□ -1.12
Sox1P53783 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC8.07□□□□□ -1.12
Sox1P53783 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC8.07□□□□□ -1.12
Sox1P53783 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Sox1P53783 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC8.07□□□□□ -1.12
Sox1P53783 Gm27373-201ENSMUST00000184017 184 ntBASIC8.07□□□□□ -1.12
Sox1P53783 Gm21181-201ENSMUST00000186249 330 ntBASIC8.07□□□□□ -1.12
Sox1P53783 Gm28187-201ENSMUST00000186885 2134 ntBASIC8.07□□□□□ -1.12
Sox1P53783 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC8.07□□□□□ -1.12
Sox1P53783 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC8.07□□□□□ -1.12
Sox1P53783 Gm28996-201ENSMUST00000190316 721 ntBASIC8.07□□□□□ -1.12
Sox1P53783 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC8.07□□□□□ -1.12
Sox1P53783 Gm17530-201ENSMUST00000194336 472 ntBASIC8.07□□□□□ -1.12
Sox1P53783 Gm18445-201ENSMUST00000195502 774 ntBASIC8.07□□□□□ -1.12
Sox1P53783 Gm44356-201ENSMUST00000196731 111 ntBASIC8.07□□□□□ -1.12
Sox1P53783 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC8.07□□□□□ -1.12
Sox1P53783 Gm42723-201ENSMUST00000199966 1044 ntBASIC8.07□□□□□ -1.12
Sox1P53783 Gm44258-201ENSMUST00000204925 301 ntBASIC8.07□□□□□ -1.12
Sox1P53783 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC8.07□□□□□ -1.12
Sox1P53783 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Sox1P53783 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
Sox1P53783 Gm29807-201ENSMUST00000220161 372 ntBASIC8.07□□□□□ -1.12
Sox1P53783 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Sox1P53783 AC124489.3-201ENSMUST00000224037 278 ntBASIC8.07□□□□□ -1.12
Sox1P53783 AC238940.2-201ENSMUST00000224202 330 ntBASIC8.07□□□□□ -1.12
Sox1P53783 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Sox1P53783 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC8.07□□□□□ -1.12
Sox1P53783 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Sox1P53783 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Sox1P53783 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sox1P53783 Pcdh15-236ENSMUST00000193174 5936 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Sox1P53783 Sub1-201ENSMUST00000022816 3372 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sox1P53783 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sox1P53783 Esrrg-201ENSMUST00000027906 5293 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sox1P53783 Gm26792-201ENSMUST00000180538 2799 ntTSL 5 BASIC8.07□□□□□ -1.12
Sox1P53783 Zfp940-201ENSMUST00000085792 2764 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sox1P53783 Pxmp4-201ENSMUST00000000896 2789 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sox1P53783 Cd300ld-201ENSMUST00000045075 2645 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sox1P53783 AC163040.1-201ENSMUST00000222979 4288 ntBASIC8.07□□□□□ -1.12
Sox1P53783 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Sox1P53783 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Sox1P53783 Eny2-201ENSMUST00000060652 3000 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Sox1P53783 Mrpl11-201ENSMUST00000025836 2882 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sox1P53783 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sox1P53783 Lrrc32-201ENSMUST00000165205 3817 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Sox1P53783 Acad10-201ENSMUST00000031412 3826 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sox1P53783 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sox1P53783 Gm6545-201ENSMUST00000217186 1786 ntBASIC8.07□□□□□ -1.12
Sox1P53783 AC122887.1-201ENSMUST00000219265 2722 ntBASIC8.07□□□□□ -1.12
Sox1P53783 Tec-203ENSMUST00000113594 2580 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sox1P53783 Gm15455-201ENSMUST00000117459 2557 ntBASIC8.07□□□□□ -1.12
Sox1P53783 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
Sox1P53783 Exoc1-203ENSMUST00000113493 3371 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Sox1P53783 Rps20-203ENSMUST00000138502 3706 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Sox1P53783 Gm44317-201ENSMUST00000204314 4214 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Sox1P53783 Fgr-204ENSMUST00000171223 2398 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Sox1P53783 Slc26a8-201ENSMUST00000114764 3670 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Sox1P53783 Rps6ka1-205ENSMUST00000157067 2637 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Sox1P53783 Dcaf11-201ENSMUST00000072530 2601 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Sox1P53783 Cd101-201ENSMUST00000147399 3299 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Sox1P53783 Clasp1-205ENSMUST00000185405 4597 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Sox1P53783 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Sox1P53783 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Sox1P53783 Lpin1-202ENSMUST00000111067 5433 ntAPPRIS P4 TSL 1 (best) BASIC8.06□□□□□ -1.12
Sox1P53783 Snapc4-202ENSMUST00000114115 4368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Sox1P53783 Kbtbd4-201ENSMUST00000090682 2437 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Sox1P53783 Gm24195-201ENSMUST00000116804 137 ntBASIC8.06□□□□□ -1.12
Sox1P53783 Gm11338-201ENSMUST00000120086 1160 ntBASIC8.06□□□□□ -1.12
Sox1P53783 Gm12140-201ENSMUST00000121214 544 ntBASIC8.06□□□□□ -1.12
Sox1P53783 Gm13669-201ENSMUST00000122366 457 ntBASIC8.06□□□□□ -1.12
Sox1P53783 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Sox1P53783 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Sox1P53783 Gm3123-201ENSMUST00000163480 480 ntBASIC8.06□□□□□ -1.12
Sox1P53783 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Sox1P53783 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Sox1P53783 Gm29156-201ENSMUST00000187764 499 ntBASIC8.06□□□□□ -1.12
Sox1P53783 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Sox1P53783 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC8.06□□□□□ -1.12
Sox1P53783 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Sox1P53783 Gm8023-201ENSMUST00000195298 903 ntBASIC8.06□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms