Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm18024-201ENSMUST00000218516 690 ntBASIC7.85□□□□□ -1.15
Usp4P35123 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC7.85□□□□□ -1.15
Usp4P35123 AC140208.1-201ENSMUST00000226609 285 ntBASIC7.85□□□□□ -1.15
Usp4P35123 AC115357.1-201ENSMUST00000227575 466 ntBASIC7.85□□□□□ -1.15
Usp4P35123 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Usp4P35123 Gm16391-201ENSMUST00000086601 447 ntBASIC7.85□□□□□ -1.15
Usp4P35123 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Usp4P35123 Gm18908-201ENSMUST00000207125 1483 ntBASIC7.85□□□□□ -1.15
Usp4P35123 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp4P35123 AC174797.5-201ENSMUST00000225055 1860 ntBASIC7.85□□□□□ -1.15
Usp4P35123 Gm43181-201ENSMUST00000197001 2072 ntBASIC7.85□□□□□ -1.15
Usp4P35123 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp4P35123 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp4P35123 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Usp4P35123 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Usp4P35123 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC7.84□□□□□ -1.15
Usp4P35123 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp4P35123 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp4P35123 Gm6350-201ENSMUST00000195099 1339 ntBASIC7.84□□□□□ -1.15
Usp4P35123 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Usp4P35123 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp4P35123 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
Usp4P35123 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp4P35123 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Usp4P35123 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp4P35123 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp4P35123 Gm43019-201ENSMUST00000196948 2863 ntBASIC7.84□□□□□ -1.15
Usp4P35123 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp4P35123 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp4P35123 Xlr5b-202ENSMUST00000114518 1652 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp4P35123 Xlr5a-204ENSMUST00000179600 1650 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Usp4P35123 Xlr5a-201ENSMUST00000078574 1650 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp4P35123 AC164437.5-201ENSMUST00000227235 4414 ntBASIC7.84□□□□□ -1.15
Usp4P35123 Ighj1-201ENSMUST00000103430 53 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Usp4P35123 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Usp4P35123 Gm13622-201ENSMUST00000120658 433 ntBASIC7.84□□□□□ -1.15
Usp4P35123 Gm14380-201ENSMUST00000122298 431 ntBASIC7.84□□□□□ -1.15
Usp4P35123 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC7.84□□□□□ -1.15
Usp4P35123 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Usp4P35123 Gm24347-201ENSMUST00000158711 142 ntBASIC7.84□□□□□ -1.15
Usp4P35123 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Usp4P35123 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Usp4P35123 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC7.84□□□□□ -1.15
Usp4P35123 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Usp4P35123 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC7.84□□□□□ -1.15
Usp4P35123 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC7.84□□□□□ -1.15
Usp4P35123 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC7.84□□□□□ -1.15
Usp4P35123 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Usp4P35123 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC7.84□□□□□ -1.15
Usp4P35123 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Usp4P35123 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC7.84□□□□□ -1.15
Usp4P35123 Gm29126-201ENSMUST00000188686 151 ntBASIC7.84□□□□□ -1.15
Usp4P35123 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC7.84□□□□□ -1.15
Usp4P35123 Gm37576-201ENSMUST00000194228 372 ntBASIC7.84□□□□□ -1.15
Usp4P35123 Gm42932-201ENSMUST00000197280 744 ntBASIC7.84□□□□□ -1.15
Usp4P35123 Gm9354-201ENSMUST00000209075 468 ntBASIC7.84□□□□□ -1.15
Usp4P35123 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC7.84□□□□□ -1.15
Usp4P35123 Gm45432-201ENSMUST00000210391 416 ntBASIC7.84□□□□□ -1.15
Usp4P35123 Gm45283-201ENSMUST00000210593 628 ntBASIC7.84□□□□□ -1.15
Usp4P35123 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC7.84□□□□□ -1.15
Usp4P35123 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC7.84□□□□□ -1.15
Usp4P35123 Gm9249-201ENSMUST00000221420 578 ntBASIC7.84□□□□□ -1.15
Usp4P35123 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC7.84□□□□□ -1.15
Usp4P35123 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC7.84□□□□□ -1.15
Usp4P35123 AL645546.2-201ENSMUST00000224526 265 ntBASIC7.84□□□□□ -1.15
Usp4P35123 AC124715.2-201ENSMUST00000226762 617 ntBASIC7.84□□□□□ -1.15
Usp4P35123 CT025525.2-201ENSMUST00000227743 423 ntBASIC7.84□□□□□ -1.15
Usp4P35123 1700018F24Rik-201ENSMUST00000031624 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp4P35123 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp4P35123 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp4P35123 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp4P35123 AC120347.1-201ENSMUST00000223326 1639 ntBASIC7.84□□□□□ -1.15
Usp4P35123 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp4P35123 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC7.84□□□□□ -1.15
Usp4P35123 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp4P35123 CT009757.6-201ENSMUST00000220661 2312 ntBASIC7.84□□□□□ -1.15
Usp4P35123 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp4P35123 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.16
Usp4P35123 Retreg1-205ENSMUST00000227275 3200 ntAPPRIS P1 BASIC7.84□□□□□ -1.16
Usp4P35123 Gm11853-201ENSMUST00000119687 1384 ntBASIC7.84□□□□□ -1.16
Usp4P35123 AC154141.1-201ENSMUST00000208403 4136 ntBASIC7.84□□□□□ -1.16
Usp4P35123 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.16
Usp4P35123 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
Usp4P35123 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Usp4P35123 Gm38697-201ENSMUST00000198061 1746 ntBASIC7.83□□□□□ -1.16
Usp4P35123 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Usp4P35123 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Usp4P35123 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
Usp4P35123 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC7.83□□□□□ -1.16
Usp4P35123 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
Usp4P35123 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Usp4P35123 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Usp4P35123 Gm8836-201ENSMUST00000198196 1348 ntBASIC7.83□□□□□ -1.16
Usp4P35123 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Usp4P35123 Gm18957-201ENSMUST00000197623 1813 ntBASIC7.83□□□□□ -1.16
Usp4P35123 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Usp4P35123 Gm45634-201ENSMUST00000209736 1990 ntBASIC7.83□□□□□ -1.16
Usp4P35123 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Usp4P35123 Gm29670-201ENSMUST00000190228 2491 ntBASIC7.83□□□□□ -1.16
Usp4P35123 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC7.83□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms