Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 BC085271-201ENSMUST00000191852 1487 ntBASIC7.07□□□□□ -1.28
ClpbQ60649 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
ClpbQ60649 Gm25083-201ENSMUST00000102319 92 ntBASIC7.07□□□□□ -1.28
ClpbQ60649 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
ClpbQ60649 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
ClpbQ60649 Gm13521-201ENSMUST00000118922 866 ntBASIC7.07□□□□□ -1.28
ClpbQ60649 Gm13038-201ENSMUST00000119886 459 ntBASIC7.07□□□□□ -1.28
ClpbQ60649 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC7.07□□□□□ -1.28
ClpbQ60649 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC7.07□□□□□ -1.28
ClpbQ60649 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ClpbQ60649 Gm7502-201ENSMUST00000169235 733 ntBASIC7.07□□□□□ -1.28
ClpbQ60649 Gm5445-201ENSMUST00000180224 480 ntBASIC7.07□□□□□ -1.28
ClpbQ60649 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
ClpbQ60649 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC7.07□□□□□ -1.28
ClpbQ60649 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC7.07□□□□□ -1.28
ClpbQ60649 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC7.07□□□□□ -1.28
ClpbQ60649 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ClpbQ60649 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC7.07□□□□□ -1.28
ClpbQ60649 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ClpbQ60649 AC125019.1-201ENSMUST00000224809 908 ntBASIC7.07□□□□□ -1.28
ClpbQ60649 AC152940.1-201ENSMUST00000226504 139 ntBASIC7.07□□□□□ -1.28
ClpbQ60649 AC166822.1-201ENSMUST00000227667 636 ntBASIC7.07□□□□□ -1.28
ClpbQ60649 Gm24613-201ENSMUST00000083266 130 ntBASIC7.07□□□□□ -1.28
ClpbQ60649 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC7.07□□□□□ -1.28
ClpbQ60649 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
ClpbQ60649 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC7.07□□□□□ -1.28
ClpbQ60649 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC7.07□□□□□ -1.28
ClpbQ60649 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC7.07□□□□□ -1.28
ClpbQ60649 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
ClpbQ60649 Gm9256-201ENSMUST00000198106 1420 ntBASIC7.07□□□□□ -1.28
ClpbQ60649 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
ClpbQ60649 Gm6011-201ENSMUST00000211736 1796 ntBASIC7.07□□□□□ -1.28
ClpbQ60649 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
ClpbQ60649 Gm37984-201ENSMUST00000191641 3733 ntBASIC7.07□□□□□ -1.28
ClpbQ60649 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ClpbQ60649 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
ClpbQ60649 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
ClpbQ60649 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ClpbQ60649 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC7.07□□□□□ -1.28
ClpbQ60649 Gm43398-201ENSMUST00000196584 2742 ntBASIC7.07□□□□□ -1.28
ClpbQ60649 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ClpbQ60649 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ClpbQ60649 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ClpbQ60649 AC139350.2-201ENSMUST00000226508 2331 ntBASIC7.06□□□□□ -1.28
ClpbQ60649 Gm6350-201ENSMUST00000195099 1339 ntBASIC7.06□□□□□ -1.28
ClpbQ60649 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC7.06□□□□□ -1.28
ClpbQ60649 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC7.06□□□□□ -1.28
ClpbQ60649 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
ClpbQ60649 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
ClpbQ60649 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
ClpbQ60649 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
ClpbQ60649 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ClpbQ60649 Gm38244-201ENSMUST00000191737 2586 ntBASIC7.06□□□□□ -1.28
ClpbQ60649 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
ClpbQ60649 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
ClpbQ60649 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
ClpbQ60649 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
ClpbQ60649 Gm23323-201ENSMUST00000104471 133 ntBASIC7.06□□□□□ -1.28
ClpbQ60649 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
ClpbQ60649 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
ClpbQ60649 Defa-ps7-201ENSMUST00000117139 168 ntBASIC7.06□□□□□ -1.28
ClpbQ60649 Gm14891-201ENSMUST00000117378 596 ntBASIC7.06□□□□□ -1.28
ClpbQ60649 Gm14480-201ENSMUST00000118521 433 ntBASIC7.06□□□□□ -1.28
ClpbQ60649 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC7.06□□□□□ -1.28
ClpbQ60649 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC7.06□□□□□ -1.28
ClpbQ60649 Gm25164-201ENSMUST00000158908 116 ntBASIC7.06□□□□□ -1.28
ClpbQ60649 Mir7005-201ENSMUST00000185089 69 ntBASIC7.06□□□□□ -1.28
ClpbQ60649 Gm28114-201ENSMUST00000187232 379 ntBASIC7.06□□□□□ -1.28
ClpbQ60649 Gm28186-201ENSMUST00000187447 679 ntBASIC7.06□□□□□ -1.28
ClpbQ60649 Gm28443-201ENSMUST00000189081 698 ntBASIC7.06□□□□□ -1.28
ClpbQ60649 Gm20690-202ENSMUST00000195126 355 ntBASIC7.06□□□□□ -1.28
ClpbQ60649 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ClpbQ60649 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC7.06□□□□□ -1.28
ClpbQ60649 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ClpbQ60649 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC7.06□□□□□ -1.28
ClpbQ60649 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC7.06□□□□□ -1.28
ClpbQ60649 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ClpbQ60649 AC130219.2-201ENSMUST00000228765 807 ntBASIC7.06□□□□□ -1.28
ClpbQ60649 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
ClpbQ60649 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
ClpbQ60649 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
ClpbQ60649 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
ClpbQ60649 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
ClpbQ60649 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ClpbQ60649 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ClpbQ60649 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ClpbQ60649 Gm37426-201ENSMUST00000195241 2470 ntBASIC7.06□□□□□ -1.28
ClpbQ60649 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
ClpbQ60649 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
ClpbQ60649 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ClpbQ60649 Gm44797-201ENSMUST00000208780 1837 ntBASIC7.06□□□□□ -1.28
ClpbQ60649 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC7.06□□□□□ -1.28
ClpbQ60649 Gm28583-201ENSMUST00000188903 2141 ntBASIC7.06□□□□□ -1.28
ClpbQ60649 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ClpbQ60649 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ClpbQ60649 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC7.06□□□□□ -1.28
ClpbQ60649 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
ClpbQ60649 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
ClpbQ60649 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ClpbQ60649 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms