Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 AC163296.1-201ENSMUST00000220004 1266 ntBASIC6.83□□□□□ -1.32
Sox6P40645 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC6.83□□□□□ -1.32
Sox6P40645 AL590616.1-201ENSMUST00000223339 574 ntBASIC6.83□□□□□ -1.32
Sox6P40645 CT009556.3-201ENSMUST00000226173 513 ntBASIC6.83□□□□□ -1.32
Sox6P40645 AC161537.1-202ENSMUST00000228450 868 ntBASIC6.83□□□□□ -1.32
Sox6P40645 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox6P40645 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC6.83□□□□□ -1.32
Sox6P40645 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.83□□□□□ -1.32
Sox6P40645 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Sox6P40645 Gm38082-201ENSMUST00000192800 6882 ntBASIC6.83□□□□□ -1.32
Sox6P40645 Gm43023-201ENSMUST00000197583 2106 ntBASIC6.83□□□□□ -1.32
Sox6P40645 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC6.83□□□□□ -1.32
Sox6P40645 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC6.83□□□□□ -1.32
Sox6P40645 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Sox6P40645 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Sox6P40645 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Sox6P40645 Gm37206-201ENSMUST00000195512 3069 ntBASIC6.82□□□□□ -1.32
Sox6P40645 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC6.82□□□□□ -1.32
Sox6P40645 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox6P40645 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox6P40645 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox6P40645 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox6P40645 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Sox6P40645 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox6P40645 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.82□□□□□ -1.32
Sox6P40645 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox6P40645 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox6P40645 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Sox6P40645 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox6P40645 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC6.82□□□□□ -1.32
Sox6P40645 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox6P40645 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox6P40645 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox6P40645 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Sox6P40645 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox6P40645 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox6P40645 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC6.82□□□□□ -1.32
Sox6P40645 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox6P40645 CT009757.6-201ENSMUST00000220661 2312 ntBASIC6.82□□□□□ -1.32
Sox6P40645 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC6.82□□□□□ -1.32
Sox6P40645 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Sox6P40645 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox6P40645 Gm43429-201ENSMUST00000197889 2251 ntBASIC6.82□□□□□ -1.32
Sox6P40645 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox6P40645 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox6P40645 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Sox6P40645 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox6P40645 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox6P40645 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC6.82□□□□□ -1.32
Sox6P40645 Gm13229-201ENSMUST00000118238 340 ntBASIC6.82□□□□□ -1.32
Sox6P40645 Gm4835-201ENSMUST00000155839 972 ntBASIC6.82□□□□□ -1.32
Sox6P40645 Gm24883-201ENSMUST00000158391 281 ntBASIC6.82□□□□□ -1.32
Sox6P40645 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC6.82□□□□□ -1.32
Sox6P40645 Gm7393-201ENSMUST00000172650 739 ntBASIC6.82□□□□□ -1.32
Sox6P40645 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Sox6P40645 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox6P40645 Gm5839-201ENSMUST00000182835 1007 ntBASIC6.82□□□□□ -1.32
Sox6P40645 Mir7115-201ENSMUST00000184275 64 ntBASIC6.82□□□□□ -1.32
Sox6P40645 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC6.82□□□□□ -1.32
Sox6P40645 Gm21181-201ENSMUST00000186249 330 ntBASIC6.82□□□□□ -1.32
Sox6P40645 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC6.82□□□□□ -1.32
Sox6P40645 Gm38203-201ENSMUST00000191815 245 ntBASIC6.82□□□□□ -1.32
Sox6P40645 Gm37392-201ENSMUST00000192098 516 ntBASIC6.82□□□□□ -1.32
Sox6P40645 Gm38063-201ENSMUST00000193990 342 ntBASIC6.82□□□□□ -1.32
Sox6P40645 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Sox6P40645 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox6P40645 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC6.82□□□□□ -1.32
Sox6P40645 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox6P40645 Gm9249-201ENSMUST00000221420 578 ntBASIC6.82□□□□□ -1.32
Sox6P40645 AC238940.2-201ENSMUST00000224202 330 ntBASIC6.82□□□□□ -1.32
Sox6P40645 AL844586.1-201ENSMUST00000224297 1042 ntBASIC6.82□□□□□ -1.32
Sox6P40645 CT010480.3-201ENSMUST00000224712 259 ntBASIC6.82□□□□□ -1.32
Sox6P40645 AC118249.1-201ENSMUST00000224822 608 ntBASIC6.82□□□□□ -1.32
Sox6P40645 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC6.82□□□□□ -1.32
Sox6P40645 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC6.82□□□□□ -1.32
Sox6P40645 Gm38147-201ENSMUST00000192397 1798 ntBASIC6.82□□□□□ -1.32
Sox6P40645 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC6.82□□□□□ -1.32
Sox6P40645 Vmn2r41-201ENSMUST00000168807 3617 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Sox6P40645 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Sox6P40645 AC158537.1-201ENSMUST00000224637 1711 ntBASIC6.81□□□□□ -1.32
Sox6P40645 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Sox6P40645 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC6.81□□□□□ -1.32
Sox6P40645 Gm42678-201ENSMUST00000197163 2221 ntBASIC6.81□□□□□ -1.32
Sox6P40645 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sox6P40645 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Sox6P40645 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox6P40645 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox6P40645 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox6P40645 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox6P40645 AC154270.2-201ENSMUST00000226755 2306 ntBASIC6.81□□□□□ -1.32
Sox6P40645 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Sox6P40645 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Sox6P40645 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
Sox6P40645 Gm14509-201ENSMUST00000117312 1286 ntBASIC6.81□□□□□ -1.32
Sox6P40645 Gm15665-201ENSMUST00000119116 847 ntBASIC6.81□□□□□ -1.32
Sox6P40645 Gm13495-201ENSMUST00000121156 537 ntBASIC6.81□□□□□ -1.32
Sox6P40645 Gm12297-201ENSMUST00000121380 979 ntBASIC6.81□□□□□ -1.32
Sox6P40645 Gm11954-201ENSMUST00000121403 349 ntBASIC6.81□□□□□ -1.32
Sox6P40645 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC6.81□□□□□ -1.32
Sox6P40645 Gm15501-202ENSMUST00000140687 625 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms