Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Col18a1P39061 Gm22210-201ENSMUST00000158101 144 ntBASIC9.55□□□□□ -0.88
Col18a1P39061 Gm7152-201ENSMUST00000163570 605 ntBASIC9.55□□□□□ -0.88
Col18a1P39061 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Col18a1P39061 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Col18a1P39061 Igkv12-67-201ENSMUST00000197806 354 ntBASIC9.55□□□□□ -0.88
Col18a1P39061 Gm43576-201ENSMUST00000197937 871 ntBASIC9.55□□□□□ -0.88
Col18a1P39061 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Col18a1P39061 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Col18a1P39061 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC9.55□□□□□ -0.88
Col18a1P39061 AC158525.1-201ENSMUST00000223806 576 ntBASIC9.55□□□□□ -0.88
Col18a1P39061 A1cf-203ENSMUST00000224400 1204 ntBASIC9.55□□□□□ -0.88
Col18a1P39061 AC121997.2-202ENSMUST00000227158 939 ntBASIC9.55□□□□□ -0.88
Col18a1P39061 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Col18a1P39061 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Col18a1P39061 Gm19024-201ENSMUST00000194681 1319 ntBASIC9.55□□□□□ -0.88
Col18a1P39061 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Col18a1P39061 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Col18a1P39061 Mef2a-204ENSMUST00000107476 4759 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Col18a1P39061 Ephx2-202ENSMUST00000224698 1985 ntBASIC9.54□□□□□ -0.88
Col18a1P39061 Lgals8-207ENSMUST00000143693 2457 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Col18a1P39061 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Col18a1P39061 Gm19972-201ENSMUST00000218180 5664 ntBASIC9.54□□□□□ -0.88
Col18a1P39061 Coq8a-217ENSMUST00000170472 3928 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Col18a1P39061 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC9.54□□□□□ -0.88
Col18a1P39061 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Col18a1P39061 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Col18a1P39061 Gm44090-201ENSMUST00000204669 1834 ntBASIC9.54□□□□□ -0.88
Col18a1P39061 Add1-205ENSMUST00000114340 3761 ntAPPRIS P3 TSL 5 BASIC9.54□□□□□ -0.88
Col18a1P39061 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC9.54□□□□□ -0.88
Col18a1P39061 Gm12099-201ENSMUST00000118660 750 ntBASIC9.54□□□□□ -0.88
Col18a1P39061 Gm12135-201ENSMUST00000119170 466 ntBASIC9.54□□□□□ -0.88
Col18a1P39061 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC9.54□□□□□ -0.88
Col18a1P39061 Gm14251-201ENSMUST00000122133 279 ntBASIC9.54□□□□□ -0.88
Col18a1P39061 Gm4613-201ENSMUST00000165488 276 ntBASIC9.54□□□□□ -0.88
Col18a1P39061 Gm26509-201ENSMUST00000180947 948 ntBASIC9.54□□□□□ -0.88
Col18a1P39061 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC9.54□□□□□ -0.88
Col18a1P39061 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC9.54□□□□□ -0.88
Col18a1P39061 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC9.54□□□□□ -0.88
Col18a1P39061 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Col18a1P39061 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Col18a1P39061 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Col18a1P39061 Atg4a-ps-201ENSMUST00000117271 2115 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Col18a1P39061 Tm4sf1-202ENSMUST00000171384 2855 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Col18a1P39061 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Col18a1P39061 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Col18a1P39061 Akap8-201ENSMUST00000002699 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Col18a1P39061 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
Col18a1P39061 Ikbkg-202ENSMUST00000064407 4530 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Col18a1P39061 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Col18a1P39061 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Col18a1P39061 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Col18a1P39061 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Col18a1P39061 Lmbrd1-206ENSMUST00000191471 4453 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Col18a1P39061 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col18a1P39061 Rngtt-202ENSMUST00000108153 4157 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col18a1P39061 Dalir-201ENSMUST00000188773 2170 ntBASIC9.53□□□□□ -0.88
Col18a1P39061 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Col18a1P39061 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col18a1P39061 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col18a1P39061 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col18a1P39061 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC9.53□□□□□ -0.88
Col18a1P39061 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
Col18a1P39061 Gm8648-201ENSMUST00000122457 221 ntBASIC9.53□□□□□ -0.88
Col18a1P39061 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC9.53□□□□□ -0.88
Col18a1P39061 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC9.53□□□□□ -0.88
Col18a1P39061 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC9.53□□□□□ -0.88
Col18a1P39061 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC9.53□□□□□ -0.88
Col18a1P39061 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC9.53□□□□□ -0.88
Col18a1P39061 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC9.53□□□□□ -0.88
Col18a1P39061 Gm18112-201ENSMUST00000219862 1195 ntBASIC9.53□□□□□ -0.88
Col18a1P39061 AC154324.1-201ENSMUST00000226711 814 ntBASIC9.53□□□□□ -0.88
Col18a1P39061 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Col18a1P39061 AC022775.1-201ENSMUST00000228163 2698 ntBASIC9.53□□□□□ -0.88
Col18a1P39061 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Col18a1P39061 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Col18a1P39061 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC9.53□□□□□ -0.88
Col18a1P39061 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col18a1P39061 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC9.53□□□□□ -0.88
Col18a1P39061 Gm44835-201ENSMUST00000205544 3181 ntBASIC9.53□□□□□ -0.88
Col18a1P39061 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col18a1P39061 Taf1-202ENSMUST00000118878 7210 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Col18a1P39061 Itgam-205ENSMUST00000120355 3701 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Col18a1P39061 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col18a1P39061 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col18a1P39061 Aloxe3-201ENSMUST00000021268 3019 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col18a1P39061 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC9.53□□□□□ -0.88
Col18a1P39061 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Col18a1P39061 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col18a1P39061 Eya3-201ENSMUST00000020197 4976 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Col18a1P39061 Sipa1l2-201ENSMUST00000108775 6365 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col18a1P39061 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
Col18a1P39061 Mir466j-201ENSMUST00000116876 122 ntBASIC9.52□□□□□ -0.88
Col18a1P39061 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Col18a1P39061 Gm11198-201ENSMUST00000119771 974 ntBASIC9.52□□□□□ -0.88
Col18a1P39061 Gm15763-201ENSMUST00000120136 403 ntBASIC9.52□□□□□ -0.88
Col18a1P39061 Mir5112-201ENSMUST00000174897 60 ntBASIC9.52□□□□□ -0.88
Col18a1P39061 Mir3085-201ENSMUST00000175493 89 ntBASIC9.52□□□□□ -0.88
Col18a1P39061 Gm28023-201ENSMUST00000184556 60 ntBASIC9.52□□□□□ -0.88
Col18a1P39061 Gm27825-201ENSMUST00000184586 60 ntBASIC9.52□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms