Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm38350-201ENSMUST00000194789 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm37990-201ENSMUST00000195821 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Col1a1P11087 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Col1a1P11087 AC134917.2-201ENSMUST00000223354 124 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col1a1P11087 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Col1a1P11087 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col1a1P11087 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Mir296-201ENSMUST00000083587 79 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Col1a1P11087 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col1a1P11087 Daam1-202ENSMUST00000221317 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col1a1P11087 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Col1a1P11087 Atf6-201ENSMUST00000027974 7246 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col1a1P11087 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col1a1P11087 Fgfbp1-202ENSMUST00000199481 2191 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Col1a1P11087 Fam168a-205ENSMUST00000207875 4077 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col1a1P11087 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col1a1P11087 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
Col1a1P11087 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Col1a1P11087 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Col1a1P11087 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col1a1P11087 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Col1a1P11087 Rbpj-208ENSMUST00000201912 5485 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Col1a1P11087 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
Col1a1P11087 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Col1a1P11087 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col1a1P11087 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col1a1P11087 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col1a1P11087 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC8.52□□□□□ -1.05
Col1a1P11087 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Col1a1P11087 Mir1953-201ENSMUST00000157866 89 ntBASIC8.52□□□□□ -1.05
Col1a1P11087 Gm29141-201ENSMUST00000190357 882 ntBASIC8.52□□□□□ -1.05
Col1a1P11087 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC8.52□□□□□ -1.05
Col1a1P11087 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC8.52□□□□□ -1.05
Col1a1P11087 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC8.52□□□□□ -1.05
Col1a1P11087 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col1a1P11087 AC122426.2-201ENSMUST00000216522 2947 ntBASIC8.52□□□□□ -1.05
Col1a1P11087 AC155941.3-201ENSMUST00000218476 308 ntBASIC8.52□□□□□ -1.05
Col1a1P11087 Gm9118-201ENSMUST00000219246 754 ntBASIC8.52□□□□□ -1.05
Col1a1P11087 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Col1a1P11087 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col1a1P11087 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Col1a1P11087 Zfp865-202ENSMUST00000076791 1129 ntBASIC8.52□□□□□ -1.05
Col1a1P11087 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col1a1P11087 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Col1a1P11087 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col1a1P11087 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col1a1P11087 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC8.52□□□□□ -1.05
Col1a1P11087 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col1a1P11087 Gm26967-201ENSMUST00000182878 2303 ntBASIC8.52□□□□□ -1.05
Col1a1P11087 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Col1a1P11087 Cacna1d-202ENSMUST00000112250 8688 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col1a1P11087 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col1a1P11087 Gm43292-201ENSMUST00000199580 2449 ntBASIC8.52□□□□□ -1.05
Col1a1P11087 Robo4-202ENSMUST00000115046 3878 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
Col1a1P11087 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
Col1a1P11087 Gm26340-201ENSMUST00000102365 99 ntBASIC8.51□□□□□ -1.05
Col1a1P11087 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col1a1P11087 Gm13754-201ENSMUST00000120486 998 ntBASIC8.51□□□□□ -1.05
Col1a1P11087 Gm15164-201ENSMUST00000122203 271 ntBASIC8.51□□□□□ -1.05
Col1a1P11087 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Col1a1P11087 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Col1a1P11087 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Col1a1P11087 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col1a1P11087 Gm5871-201ENSMUST00000176461 718 ntBASIC8.51□□□□□ -1.05
Col1a1P11087 Gm28952-201ENSMUST00000189285 681 ntBASIC8.51□□□□□ -1.05
Col1a1P11087 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC8.51□□□□□ -1.05
Col1a1P11087 Gm44342-201ENSMUST00000196874 129 ntBASIC8.51□□□□□ -1.05
Col1a1P11087 Gm44383-201ENSMUST00000198940 129 ntBASIC8.51□□□□□ -1.05
Col1a1P11087 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC8.51□□□□□ -1.05
Col1a1P11087 AC157085.1-201ENSMUST00000216343 162 ntBASIC8.51□□□□□ -1.05
Col1a1P11087 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col1a1P11087 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC8.51□□□□□ -1.05
Col1a1P11087 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Col1a1P11087 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Col1a1P11087 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Col1a1P11087 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Col1a1P11087 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col1a1P11087 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col1a1P11087 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col1a1P11087 Myh15-201ENSMUST00000168680 6340 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Col1a1P11087 Col12a1-202ENSMUST00000121227 9953 ntTSL 5 BASIC8.51□□□□□ -1.05
Col1a1P11087 Gm37806-201ENSMUST00000194524 6387 ntBASIC8.51□□□□□ -1.05
Col1a1P11087 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col1a1P11087 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Col1a1P11087 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col1a1P11087 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col1a1P11087 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col1a1P11087 Ing5-201ENSMUST00000027505 4533 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col1a1P11087 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC8.51□□□□□ -1.05
Col1a1P11087 Plekha6-202ENSMUST00000105082 7085 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col1a1P11087 Rbm12-201ENSMUST00000059647 6667 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col1a1P11087 Vmn1r180-201ENSMUST00000173816 5060 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Col1a1P11087 Gm21043-201ENSMUST00000199316 1517 ntBASIC8.51□□□□□ -1.05
Col1a1P11087 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Col1a1P11087 Slc5a6-201ENSMUST00000080431 3218 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col1a1P11087 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms