Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Hoxc9P09633 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxc9P09633 Cd300a-201ENSMUST00000045151 4633 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxc9P09633 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC9.41□□□□□ -0.9
Hoxc9P09633 AC164433.1-201ENSMUST00000226138 1544 ntBASIC9.41□□□□□ -0.9
Hoxc9P09633 Cdh23-202ENSMUST00000105461 11096 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Hoxc9P09633 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC9.41□□□□□ -0.9
Hoxc9P09633 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxc9P09633 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxc9P09633 Gm10513-201ENSMUST00000194203 6468 ntBASIC9.41□□□□□ -0.9
Hoxc9P09633 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxc9P09633 Tubgcp6-202ENSMUST00000109353 7635 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
Hoxc9P09633 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC9.41□□□□□ -0.9
Hoxc9P09633 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Hoxc9P09633 Gm13878-201ENSMUST00000117986 577 ntBASIC9.41□□□□□ -0.9
Hoxc9P09633 Gm7613-201ENSMUST00000139070 487 ntBASIC9.41□□□□□ -0.9
Hoxc9P09633 Gm25660-201ENSMUST00000158470 104 ntBASIC9.41□□□□□ -0.9
Hoxc9P09633 Gm24812-201ENSMUST00000175315 284 ntBASIC9.41□□□□□ -0.9
Hoxc9P09633 Gm24756-201ENSMUST00000177002 96 ntBASIC9.41□□□□□ -0.9
Hoxc9P09633 Gm7867-201ENSMUST00000189856 546 ntBASIC9.41□□□□□ -0.9
Hoxc9P09633 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC9.41□□□□□ -0.9
Hoxc9P09633 AC159267.1-201ENSMUST00000226702 678 ntBASIC9.41□□□□□ -0.9
Hoxc9P09633 AC116596.2-203ENSMUST00000227345 731 ntBASIC9.41□□□□□ -0.9
Hoxc9P09633 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxc9P09633 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Hoxc9P09633 n-R5s217-201ENSMUST00000083341 116 ntBASIC9.41□□□□□ -0.9
Hoxc9P09633 Gm24924-201ENSMUST00000084007 164 ntBASIC9.41□□□□□ -0.9
Hoxc9P09633 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Hoxc9P09633 Gm26575-201ENSMUST00000181714 2232 ntBASIC9.41□□□□□ -0.9
Hoxc9P09633 Gm36120-201ENSMUST00000214393 1734 ntTSL 5 BASIC9.41□□□□□ -0.9
Hoxc9P09633 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxc9P09633 Fmr1-202ENSMUST00000114653 4058 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxc9P09633 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxc9P09633 Wee2-201ENSMUST00000038907 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxc9P09633 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Hoxc9P09633 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Hoxc9P09633 Wdfy4-202ENSMUST00000130509 10158 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Hoxc9P09633 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc9P09633 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Hoxc9P09633 Gm39323-201ENSMUST00000215913 2942 ntTSL 5 BASIC9.4□□□□□ -0.9
Hoxc9P09633 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc9P09633 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Hoxc9P09633 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC9.4□□□□□ -0.9
Hoxc9P09633 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Hoxc9P09633 Gm14729-201ENSMUST00000118373 689 ntBASIC9.4□□□□□ -0.9
Hoxc9P09633 Gm8312-201ENSMUST00000119380 618 ntBASIC9.4□□□□□ -0.9
Hoxc9P09633 Gm14251-201ENSMUST00000122133 279 ntBASIC9.4□□□□□ -0.9
Hoxc9P09633 Gm12778-201ENSMUST00000122341 333 ntBASIC9.4□□□□□ -0.9
Hoxc9P09633 Mir1932-201ENSMUST00000157390 90 ntBASIC9.4□□□□□ -0.9
Hoxc9P09633 Gm4613-201ENSMUST00000165488 276 ntBASIC9.4□□□□□ -0.9
Hoxc9P09633 Gm18808-201ENSMUST00000173316 462 ntBASIC9.4□□□□□ -0.9
Hoxc9P09633 Mir6989-201ENSMUST00000184812 65 ntBASIC9.4□□□□□ -0.9
Hoxc9P09633 Gm38022-201ENSMUST00000191762 403 ntBASIC9.4□□□□□ -0.9
Hoxc9P09633 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc9P09633 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC9.4□□□□□ -0.9
Hoxc9P09633 Gm7019-201ENSMUST00000194122 369 ntBASIC9.4□□□□□ -0.9
Hoxc9P09633 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC9.4□□□□□ -0.9
Hoxc9P09633 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC9.4□□□□□ -0.9
Hoxc9P09633 Gm44896-201ENSMUST00000206190 772 ntBASIC9.4□□□□□ -0.9
Hoxc9P09633 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc9P09633 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc9P09633 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC9.4□□□□□ -0.9
Hoxc9P09633 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Hoxc9P09633 Gm16020-201ENSMUST00000084281 210 ntBASIC9.4□□□□□ -0.9
Hoxc9P09633 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
Hoxc9P09633 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc9P09633 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc9P09633 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Hoxc9P09633 Gm37161-201ENSMUST00000191994 2697 ntBASIC9.4□□□□□ -0.9
Hoxc9P09633 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Hoxc9P09633 AC159264.1-202ENSMUST00000224856 3162 ntBASIC9.4□□□□□ -0.91
Hoxc9P09633 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Hoxc9P09633 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Hoxc9P09633 2810039B14Rik-204ENSMUST00000184801 2796 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Hoxc9P09633 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Hoxc9P09633 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxc9P09633 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxc9P09633 Gm14252-201ENSMUST00000131801 3215 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxc9P09633 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxc9P09633 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxc9P09633 Etl4-205ENSMUST00000114607 3055 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Hoxc9P09633 Gm42820-201ENSMUST00000200084 3063 ntBASIC9.39□□□□□ -0.91
Hoxc9P09633 Gm42668-201ENSMUST00000200747 2487 ntBASIC9.39□□□□□ -0.91
Hoxc9P09633 Pknox1-201ENSMUST00000097352 4172 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxc9P09633 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Hoxc9P09633 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC9.39□□□□□ -0.91
Hoxc9P09633 Apc-ps1-201ENSMUST00000119356 470 ntBASIC9.39□□□□□ -0.91
Hoxc9P09633 Gm7494-201ENSMUST00000121248 441 ntBASIC9.39□□□□□ -0.91
Hoxc9P09633 Gm8722-201ENSMUST00000121466 769 ntBASIC9.39□□□□□ -0.91
Hoxc9P09633 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC9.39□□□□□ -0.91
Hoxc9P09633 Gm9672-201ENSMUST00000166437 425 ntBASIC9.39□□□□□ -0.91
Hoxc9P09633 Gm4202-201ENSMUST00000169025 733 ntBASIC9.39□□□□□ -0.91
Hoxc9P09633 Mir5617-201ENSMUST00000176786 57 ntBASIC9.39□□□□□ -0.91
Hoxc9P09633 6720483E21Rik-201ENSMUST00000181654 1120 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Hoxc9P09633 Gm21614-201ENSMUST00000183260 1005 ntBASIC9.39□□□□□ -0.91
Hoxc9P09633 Gm27186-201ENSMUST00000184223 307 ntBASIC9.39□□□□□ -0.91
Hoxc9P09633 Gm27804-201ENSMUST00000185135 119 ntBASIC9.39□□□□□ -0.91
Hoxc9P09633 Gm17822-201ENSMUST00000204307 351 ntBASIC9.39□□□□□ -0.91
Hoxc9P09633 Gm4042-201ENSMUST00000216946 637 ntBASIC9.39□□□□□ -0.91
Hoxc9P09633 AC123917.1-201ENSMUST00000228063 1048 ntBASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms