Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Mir8097-201ENSMUST00000185150 119 ntBASIC8.99□□□□□ -0.97
Sf3a1Q8K4Z5 Gm3121-201ENSMUST00000187086 406 ntBASIC8.99□□□□□ -0.97
Sf3a1Q8K4Z5 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Sf3a1Q8K4Z5 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Sf3a1Q8K4Z5 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Sf3a1Q8K4Z5 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC8.99□□□□□ -0.97
Sf3a1Q8K4Z5 Gm45432-201ENSMUST00000210391 416 ntBASIC8.99□□□□□ -0.97
Sf3a1Q8K4Z5 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC8.99□□□□□ -0.97
Sf3a1Q8K4Z5 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC8.99□□□□□ -0.97
Sf3a1Q8K4Z5 AC123705.1-201ENSMUST00000222512 2058 ntBASIC8.99□□□□□ -0.97
Sf3a1Q8K4Z5 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Sf3a1Q8K4Z5 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC8.99□□□□□ -0.97
Sf3a1Q8K4Z5 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Sf3a1Q8K4Z5 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Sf3a1Q8K4Z5 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Sf3a1Q8K4Z5 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Sf3a1Q8K4Z5 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC8.99□□□□□ -0.97
Sf3a1Q8K4Z5 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Sf3a1Q8K4Z5 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Sf3a1Q8K4Z5 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Sf3a1Q8K4Z5 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Gm11850-201ENSMUST00000119679 479 ntBASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Gm37293-201ENSMUST00000191658 295 ntBASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Gm5314-201ENSMUST00000204852 466 ntBASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Gm45198-201ENSMUST00000206796 591 ntBASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Gm18562-201ENSMUST00000209949 915 ntBASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Gpr87-201ENSMUST00000056898 1080 ntBASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Gm37953-201ENSMUST00000195293 1884 ntBASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Sf3a1Q8K4Z5 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Gm10601-201ENSMUST00000120436 1422 ntBASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Gm22438-201ENSMUST00000104049 132 ntBASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Gm2735-201ENSMUST00000136133 277 ntBASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Gm17046-201ENSMUST00000168078 850 ntBASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Gm26238-201ENSMUST00000175538 117 ntBASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Gm35108-201ENSMUST00000194321 699 ntBASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Gm33191-201ENSMUST00000195604 699 ntBASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Gm18503-201ENSMUST00000220340 728 ntBASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 CT025639.1-201ENSMUST00000223906 1375 ntBASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Gm26945-201ENSMUST00000183191 2011 ntBASIC8.97□□□□□ -0.97
Sf3a1Q8K4Z5 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Sf3a1Q8K4Z5 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
Sf3a1Q8K4Z5 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Sf3a1Q8K4Z5 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Sf3a1Q8K4Z5 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms