Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Gm20900-201ENSMUST00000078729 472 ntBASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC8.62□□□□□ -1.03
Vps53Q8CCB4 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Vps53Q8CCB4 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Gm43422-201ENSMUST00000199780 3571 ntBASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Gm44116-201ENSMUST00000204269 1525 ntBASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Gm6786-201ENSMUST00000203165 1915 ntBASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Gm24195-201ENSMUST00000116804 137 ntBASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Gm12331-201ENSMUST00000119927 622 ntBASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Gm25281-201ENSMUST00000157270 104 ntBASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Gm10012-202ENSMUST00000170379 372 ntBASIC8.61□□□□□ -1.03
Vps53Q8CCB4 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Gm21181-201ENSMUST00000186249 330 ntBASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Gm9419-201ENSMUST00000200672 567 ntBASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Gm6667-201ENSMUST00000217169 564 ntBASIC8.61□□□□□ -1.03
Vps53Q8CCB4 AC120002.1-201ENSMUST00000218456 331 ntBASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Gm18972-201ENSMUST00000218873 630 ntBASIC8.61□□□□□ -1.03
Vps53Q8CCB4 AC238940.2-201ENSMUST00000224202 330 ntBASIC8.61□□□□□ -1.03
Vps53Q8CCB4 CT010480.3-201ENSMUST00000224712 259 ntBASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Gm10601-201ENSMUST00000120436 1422 ntBASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 CT010453.1-201ENSMUST00000226795 2201 ntBASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Gm43606-201ENSMUST00000195938 3556 ntBASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Gm16072-201ENSMUST00000119574 2377 ntBASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Vps53Q8CCB4 Gm42597-201ENSMUST00000196663 1544 ntBASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Gm18194-202ENSMUST00000210952 3442 ntBASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 AC158986.1-201ENSMUST00000228391 3455 ntBASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Gm22231-201ENSMUST00000101027 73 ntBASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Gm13229-201ENSMUST00000118238 340 ntBASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Gm24530-201ENSMUST00000157948 288 ntBASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Gm6434-201ENSMUST00000163316 372 ntBASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Gm21182-201ENSMUST00000178899 794 ntBASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Gm29562-201ENSMUST00000190113 904 ntBASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Gm43558-201ENSMUST00000200155 210 ntBASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms