Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm37322-201ENSMUST00000193409 337 ntBASIC10.24□□□□□ -0.77
Usp47Q8BY87 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC10.24□□□□□ -0.77
Usp47Q8BY87 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC10.24□□□□□ -0.77
Usp47Q8BY87 AC121542.2-201ENSMUST00000227529 400 ntBASIC10.24□□□□□ -0.77
Usp47Q8BY87 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Usp47Q8BY87 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Usp47Q8BY87 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Usp47Q8BY87 Vmn1r26-203ENSMUST00000228070 4419 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Usp47Q8BY87 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC10.24□□□□□ -0.77
Usp47Q8BY87 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Tbc1d8b-201ENSMUST00000096313 5094 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Olfr1512-202ENSMUST00000214980 2082 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Usp47Q8BY87 AC107453.4-201ENSMUST00000227068 1817 ntBASIC10.23□□□□□ -0.77
Usp47Q8BY87 Rlim-202ENSMUST00000121153 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Gm12903-201ENSMUST00000121015 544 ntBASIC10.23□□□□□ -0.77
Usp47Q8BY87 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Gm46379-201ENSMUST00000222551 265 ntBASIC10.23□□□□□ -0.77
Usp47Q8BY87 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Usp47Q8BY87 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Gm40778-201ENSMUST00000217825 1344 ntBASIC10.23□□□□□ -0.77
Usp47Q8BY87 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Usp47Q8BY87 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Usp47Q8BY87 CT571245.1-201ENSMUST00000218642 3465 ntBASIC10.22□□□□□ -0.77
Usp47Q8BY87 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Usp47Q8BY87 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Usp47Q8BY87 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Usp47Q8BY87 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
Usp47Q8BY87 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC10.22□□□□□ -0.77
Usp47Q8BY87 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Usp47Q8BY87 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Usp47Q8BY87 Olfr429-202ENSMUST00000216346 2510 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Usp47Q8BY87 Sorbs2-201ENSMUST00000067065 6337 ntTSL 5 BASIC10.22□□□□□ -0.77
Usp47Q8BY87 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC10.22□□□□□ -0.77
Usp47Q8BY87 Traf3-202ENSMUST00000060274 6896 ntTSL 5 BASIC10.22□□□□□ -0.77
Usp47Q8BY87 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Usp47Q8BY87 AC187103.1-201ENSMUST00000224641 1475 ntBASIC10.22□□□□□ -0.77
Usp47Q8BY87 Gm44021-201ENSMUST00000203055 3516 ntBASIC10.22□□□□□ -0.77
Usp47Q8BY87 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Usp47Q8BY87 Gm26416-201ENSMUST00000104280 134 ntBASIC10.22□□□□□ -0.77
Usp47Q8BY87 Gm9439-201ENSMUST00000119554 973 ntBASIC10.22□□□□□ -0.77
Usp47Q8BY87 Gm12174-201ENSMUST00000119853 813 ntBASIC10.22□□□□□ -0.77
Usp47Q8BY87 Gm13776-201ENSMUST00000122236 1261 ntBASIC10.22□□□□□ -0.77
Usp47Q8BY87 Gm7426-201ENSMUST00000179046 404 ntBASIC10.22□□□□□ -0.77
Usp47Q8BY87 Mir6987-201ENSMUST00000184789 73 ntBASIC10.22□□□□□ -0.77
Usp47Q8BY87 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Usp47Q8BY87 Gm37669-201ENSMUST00000192184 820 ntBASIC10.22□□□□□ -0.77
Usp47Q8BY87 Gm8182-201ENSMUST00000197863 769 ntBASIC10.22□□□□□ -0.77
Usp47Q8BY87 Gm4525-201ENSMUST00000198831 254 ntBASIC10.22□□□□□ -0.77
Usp47Q8BY87 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Usp47Q8BY87 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Usp47Q8BY87 Gm34424-201ENSMUST00000213400 782 ntBASIC10.22□□□□□ -0.77
Usp47Q8BY87 Gm18655-201ENSMUST00000214802 1090 ntBASIC10.22□□□□□ -0.77
Usp47Q8BY87 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Usp47Q8BY87 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Usp47Q8BY87 AC152394.1-201ENSMUST00000227360 1086 ntBASIC10.22□□□□□ -0.77
Usp47Q8BY87 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Usp47Q8BY87 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Usp47Q8BY87 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC10.22□□□□□ -0.77
Usp47Q8BY87 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC10.22□□□□□ -0.77
Usp47Q8BY87 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Usp47Q8BY87 CT009604.1-201ENSMUST00000223900 1328 ntBASIC10.22□□□□□ -0.77
Usp47Q8BY87 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Usp47Q8BY87 Gm37648-201ENSMUST00000192072 2563 ntBASIC10.22□□□□□ -0.77
Usp47Q8BY87 Gm45354-201ENSMUST00000199820 2557 ntBASIC10.22□□□□□ -0.77
Usp47Q8BY87 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Usp47Q8BY87 AC091783.1-201ENSMUST00000223614 1613 ntBASIC10.21□□□□□ -0.77
Usp47Q8BY87 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Usp47Q8BY87 4930447C04Rik-208ENSMUST00000136075 1970 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Usp47Q8BY87 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Usp47Q8BY87 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Usp47Q8BY87 Helz2-202ENSMUST00000108831 10109 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.77
Usp47Q8BY87 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 112 ms