Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Gm42597-201ENSMUST00000196663 1544 ntBASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Commd8-201ENSMUST00000013693 3895 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Snhg17-209ENSMUST00000186993 3144 ntBASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Gm13821-201ENSMUST00000202029 3201 ntBASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 AC122769.1-201ENSMUST00000226930 1714 ntBASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC8.04□□□□□ -1.12
Ccdc88cQ6VGS5 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Gm22774-201ENSMUST00000102084 109 ntBASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Gm12944-201ENSMUST00000119262 463 ntBASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Gm16027-201ENSMUST00000161618 758 ntBASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Gm8101-201ENSMUST00000192796 478 ntBASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Gm43595-201ENSMUST00000196464 1071 ntBASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Gm24826-202ENSMUST00000197298 216 ntBASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Gm43396-201ENSMUST00000197506 706 ntBASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Gm42723-201ENSMUST00000199966 1044 ntBASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Gm45432-201ENSMUST00000210391 416 ntBASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Gm17611-202ENSMUST00000220613 814 ntBASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 AC164294.1-201ENSMUST00000224682 688 ntBASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 AC159301.1-202ENSMUST00000225860 2133 ntBASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Gm38386-201ENSMUST00000194293 3421 ntBASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Gm13486-201ENSMUST00000119910 282 ntBASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Gm16026-205ENSMUST00000162923 641 ntBASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Gm20432-201ENSMUST00000173716 250 ntBASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Gm19007-201ENSMUST00000217746 874 ntBASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 4930551I15Rik-201ENSMUST00000219700 2143 ntTSL 5 BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 AC115304.1-202ENSMUST00000226850 837 ntBASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc88cQ6VGS5 Dlg2-201ENSMUST00000074273 5278 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.12
Ccdc88cQ6VGS5 Myo1e-201ENSMUST00000034745 4625 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Ccdc88cQ6VGS5 A730049H05Rik-201ENSMUST00000057977 2239 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Ccdc88cQ6VGS5 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.12
Ccdc88cQ6VGS5 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Ccdc88cQ6VGS5 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.12
Ccdc88cQ6VGS5 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC8.02□□□□□ -1.13
Ccdc88cQ6VGS5 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Ccdc88cQ6VGS5 Gm37863-201ENSMUST00000194911 1457 ntBASIC8.02□□□□□ -1.13
Ccdc88cQ6VGS5 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Ccdc88cQ6VGS5 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Ccdc88cQ6VGS5 Gm25757-201ENSMUST00000103986 123 ntBASIC8.02□□□□□ -1.13
Ccdc88cQ6VGS5 Gm13900-201ENSMUST00000119402 498 ntBASIC8.02□□□□□ -1.13
Ccdc88cQ6VGS5 Gm15153-201ENSMUST00000119867 274 ntBASIC8.02□□□□□ -1.13
Ccdc88cQ6VGS5 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Ccdc88cQ6VGS5 Gm22728-201ENSMUST00000158087 129 ntBASIC8.02□□□□□ -1.13
Ccdc88cQ6VGS5 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Ccdc88cQ6VGS5 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC8.02□□□□□ -1.13
Ccdc88cQ6VGS5 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Ccdc88cQ6VGS5 Gm37295-201ENSMUST00000192186 109 ntBASIC8.02□□□□□ -1.13
Ccdc88cQ6VGS5 Gm35108-201ENSMUST00000194321 699 ntBASIC8.02□□□□□ -1.13
Ccdc88cQ6VGS5 Gm33191-201ENSMUST00000195604 699 ntBASIC8.02□□□□□ -1.13
Ccdc88cQ6VGS5 Gm19764-201ENSMUST00000203630 649 ntBASIC8.02□□□□□ -1.13
Ccdc88cQ6VGS5 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Ccdc88cQ6VGS5 CT030238.3-201ENSMUST00000227352 875 ntBASIC8.02□□□□□ -1.13
Ccdc88cQ6VGS5 Gm6887-201ENSMUST00000080945 482 ntBASIC8.02□□□□□ -1.13
Ccdc88cQ6VGS5 Gm6419-201ENSMUST00000097166 429 ntBASIC8.02□□□□□ -1.13
Ccdc88cQ6VGS5 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Ccdc88cQ6VGS5 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Ccdc88cQ6VGS5 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Ccdc88cQ6VGS5 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Ccdc88cQ6VGS5 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Ccdc88cQ6VGS5 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Ccdc88cQ6VGS5 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Ccdc88cQ6VGS5 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms