Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC7.86□□□□□ -1.15
NcanP55066 Gm28801-201ENSMUST00000188761 449 ntBASIC7.86□□□□□ -1.15
NcanP55066 Gm7867-201ENSMUST00000189856 546 ntBASIC7.86□□□□□ -1.15
NcanP55066 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
NcanP55066 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC7.86□□□□□ -1.15
NcanP55066 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC7.86□□□□□ -1.15
NcanP55066 Gm45279-201ENSMUST00000210315 391 ntBASIC7.86□□□□□ -1.15
NcanP55066 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC7.86□□□□□ -1.15
NcanP55066 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC7.86□□□□□ -1.15
NcanP55066 AC159635.1-201ENSMUST00000220905 2102 ntBASIC7.86□□□□□ -1.15
NcanP55066 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC7.86□□□□□ -1.15
NcanP55066 Ttc30a1-201ENSMUST00000099994 3721 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
NcanP55066 Bdp1-204ENSMUST00000109379 7567 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
NcanP55066 Cyp2c29-201ENSMUST00000003137 1783 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
NcanP55066 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
NcanP55066 Mynn-201ENSMUST00000047502 3394 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
NcanP55066 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
NcanP55066 Gm26896-201ENSMUST00000180482 2526 ntTSL 5 BASIC7.86□□□□□ -1.15
NcanP55066 F10-202ENSMUST00000063820 2503 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
NcanP55066 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
NcanP55066 Stat2-202ENSMUST00000105238 4397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
NcanP55066 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
NcanP55066 Zfp445-206ENSMUST00000216063 6189 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
NcanP55066 Sptan1-203ENSMUST00000100225 7892 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
NcanP55066 9130214F15Rik-201ENSMUST00000208727 1653 ntBASIC7.86□□□□□ -1.15
NcanP55066 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
NcanP55066 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
NcanP55066 Map4k4-215ENSMUST00000195259 3719 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
NcanP55066 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
NcanP55066 Il1rl1-203ENSMUST00000173514 2661 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NcanP55066 Gm45515-201ENSMUST00000210796 2141 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NcanP55066 Cblb-205ENSMUST00000227756 3378 ntBASIC7.85□□□□□ -1.15
NcanP55066 Kpna3-201ENSMUST00000022496 4069 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
NcanP55066 Gm38352-201ENSMUST00000194459 2557 ntBASIC7.85□□□□□ -1.15
NcanP55066 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
NcanP55066 Runx1t1-203ENSMUST00000098257 2332 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
NcanP55066 Slc12a3-201ENSMUST00000034218 3299 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
NcanP55066 Hrh1-203ENSMUST00000160780 2782 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
NcanP55066 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NcanP55066 Polr3f-201ENSMUST00000028914 4403 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
NcanP55066 Gm43609-201ENSMUST00000199084 2712 ntBASIC7.85□□□□□ -1.15
NcanP55066 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NcanP55066 Gm37829-201ENSMUST00000193864 2213 ntBASIC7.85□□□□□ -1.15
NcanP55066 Gm10862-201ENSMUST00000193956 3350 ntBASIC7.85□□□□□ -1.15
NcanP55066 Fbxw10-201ENSMUST00000036085 3354 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
NcanP55066 Gm13451-201ENSMUST00000117649 592 ntBASIC7.85□□□□□ -1.15
NcanP55066 Gm12573-201ENSMUST00000118158 286 ntBASIC7.85□□□□□ -1.15
NcanP55066 Gm15765-201ENSMUST00000118407 910 ntBASIC7.85□□□□□ -1.15
NcanP55066 Gm15047-201ENSMUST00000118891 454 ntBASIC7.85□□□□□ -1.15
NcanP55066 Gm5319-201ENSMUST00000118965 873 ntBASIC7.85□□□□□ -1.15
NcanP55066 Gm14787-201ENSMUST00000121236 388 ntBASIC7.85□□□□□ -1.15
NcanP55066 Gm22312-201ENSMUST00000158005 130 ntBASIC7.85□□□□□ -1.15
NcanP55066 Gm23896-201ENSMUST00000158109 130 ntBASIC7.85□□□□□ -1.15
NcanP55066 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC7.85□□□□□ -1.15
NcanP55066 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC7.85□□□□□ -1.15
NcanP55066 Gm19088-201ENSMUST00000198800 566 ntBASIC7.85□□□□□ -1.15
NcanP55066 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC7.85□□□□□ -1.15
NcanP55066 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC7.85□□□□□ -1.15
NcanP55066 Gm18040-201ENSMUST00000217922 827 ntBASIC7.85□□□□□ -1.15
NcanP55066 AC124103.1-201ENSMUST00000227564 1027 ntBASIC7.85□□□□□ -1.15
NcanP55066 AC154757.2-201ENSMUST00000228885 743 ntBASIC7.85□□□□□ -1.15
NcanP55066 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
NcanP55066 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC7.85□□□□□ -1.15
NcanP55066 Olfr1504-201ENSMUST00000078282 1085 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
NcanP55066 Mir134-201ENSMUST00000083492 71 ntBASIC7.85□□□□□ -1.15
NcanP55066 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
NcanP55066 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
NcanP55066 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
NcanP55066 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NcanP55066 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NcanP55066 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC7.85□□□□□ -1.15
NcanP55066 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC7.85□□□□□ -1.15
NcanP55066 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC7.85□□□□□ -1.15
NcanP55066 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC7.85□□□□□ -1.15
NcanP55066 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC7.85□□□□□ -1.15
NcanP55066 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC7.85□□□□□ -1.15
NcanP55066 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC7.85□□□□□ -1.15
NcanP55066 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NcanP55066 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC7.85□□□□□ -1.15
NcanP55066 Gm38236-201ENSMUST00000192661 3229 ntBASIC7.85□□□□□ -1.15
NcanP55066 E230020D15Rik-201ENSMUST00000208097 5899 ntBASIC7.85□□□□□ -1.15
NcanP55066 4831440D22Rik-201ENSMUST00000211287 2929 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NcanP55066 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
NcanP55066 Gm18726-201ENSMUST00000218175 2010 ntBASIC7.85□□□□□ -1.15
NcanP55066 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
NcanP55066 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
NcanP55066 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
NcanP55066 Abhd2-201ENSMUST00000037315 6877 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
NcanP55066 Dusp3-203ENSMUST00000107173 4311 ntTSL 2 BASIC7.84□□□□□ -1.15
NcanP55066 Olfr1426-206ENSMUST00000219996 2436 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
NcanP55066 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
NcanP55066 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
NcanP55066 Ccr6-201ENSMUST00000097418 1755 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
NcanP55066 Sema5a-201ENSMUST00000067458 10809 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
NcanP55066 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
NcanP55066 Gm43839-201ENSMUST00000196183 2325 ntBASIC7.84□□□□□ -1.15
NcanP55066 Uggt1-201ENSMUST00000046875 9033 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
NcanP55066 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC7.84□□□□□ -1.15
NcanP55066 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
NcanP55066 Gm16204-201ENSMUST00000117864 1897 ntBASIC7.84□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 264.4 ms