Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox3P53784 Gm15316-201ENSMUST00000121082 421 ntBASIC7.08□□□□□ -1.28
Sox3P53784 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC7.08□□□□□ -1.28
Sox3P53784 Gm25780-201ENSMUST00000122528 253 ntBASIC7.08□□□□□ -1.28
Sox3P53784 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC7.08□□□□□ -1.28
Sox3P53784 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC7.08□□□□□ -1.28
Sox3P53784 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC7.08□□□□□ -1.28
Sox3P53784 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC7.08□□□□□ -1.28
Sox3P53784 Gm23018-201ENSMUST00000177928 109 ntBASIC7.08□□□□□ -1.28
Sox3P53784 Gm6100-201ENSMUST00000180253 403 ntBASIC7.08□□□□□ -1.28
Sox3P53784 Pea15b-201ENSMUST00000182806 387 ntBASIC7.08□□□□□ -1.28
Sox3P53784 Gm19480-201ENSMUST00000185547 667 ntBASIC7.08□□□□□ -1.28
Sox3P53784 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC7.08□□□□□ -1.28
Sox3P53784 Gm28983-201ENSMUST00000186685 614 ntBASIC7.08□□□□□ -1.28
Sox3P53784 Gm28150-201ENSMUST00000187305 614 ntBASIC7.08□□□□□ -1.28
Sox3P53784 Gm28377-201ENSMUST00000189695 720 ntBASIC7.08□□□□□ -1.28
Sox3P53784 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC7.08□□□□□ -1.28
Sox3P53784 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC7.08□□□□□ -1.28
Sox3P53784 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Sox3P53784 Gm45299-201ENSMUST00000210199 420 ntBASIC7.08□□□□□ -1.28
Sox3P53784 Gm33778-201ENSMUST00000216884 704 ntBASIC7.08□□□□□ -1.28
Sox3P53784 AC163621.1-201ENSMUST00000220695 379 ntBASIC7.08□□□□□ -1.28
Sox3P53784 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC7.08□□□□□ -1.28
Sox3P53784 AC159205.7-201ENSMUST00000225988 692 ntBASIC7.08□□□□□ -1.28
Sox3P53784 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Sox3P53784 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox3P53784 Gm10247-201ENSMUST00000090395 333 ntBASIC7.08□□□□□ -1.28
Sox3P53784 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Sox3P53784 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Sox3P53784 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox3P53784 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC7.08□□□□□ -1.28
Sox3P53784 Gm37364-201ENSMUST00000192533 3920 ntBASIC7.08□□□□□ -1.28
Sox3P53784 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC7.08□□□□□ -1.28
Sox3P53784 Dennd6a-203ENSMUST00000224111 2692 ntBASIC7.08□□□□□ -1.28
Sox3P53784 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox3P53784 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox3P53784 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox3P53784 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox3P53784 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox3P53784 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox3P53784 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox3P53784 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox3P53784 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox3P53784 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox3P53784 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Sox3P53784 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox3P53784 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox3P53784 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox3P53784 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox3P53784 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Sox3P53784 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox3P53784 Gm45657-201ENSMUST00000211318 1349 ntBASIC7.07□□□□□ -1.28
Sox3P53784 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox3P53784 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
Sox3P53784 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox3P53784 Gm37785-201ENSMUST00000195783 2408 ntBASIC7.07□□□□□ -1.28
Sox3P53784 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox3P53784 CT010505.3-201ENSMUST00000227835 1651 ntBASIC7.07□□□□□ -1.28
Sox3P53784 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox3P53784 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox3P53784 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox3P53784 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox3P53784 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox3P53784 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Sox3P53784 Gm13414-201ENSMUST00000117516 727 ntBASIC7.07□□□□□ -1.28
Sox3P53784 Gm15105-201ENSMUST00000117777 204 ntBASIC7.07□□□□□ -1.28
Sox3P53784 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC7.07□□□□□ -1.28
Sox3P53784 Gm11622-201ENSMUST00000120525 691 ntBASIC7.07□□□□□ -1.28
Sox3P53784 Gm13726-201ENSMUST00000121278 794 ntBASIC7.07□□□□□ -1.28
Sox3P53784 Gm14826-201ENSMUST00000121284 901 ntBASIC7.07□□□□□ -1.28
Sox3P53784 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC7.07□□□□□ -1.28
Sox3P53784 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox3P53784 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC7.07□□□□□ -1.28
Sox3P53784 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox3P53784 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
Sox3P53784 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox3P53784 Mir8120-201ENSMUST00000185035 139 ntBASIC7.07□□□□□ -1.28
Sox3P53784 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox3P53784 Gm1969-201ENSMUST00000198125 1220 ntBASIC7.07□□□□□ -1.28
Sox3P53784 Gm42883-201ENSMUST00000202594 222 ntBASIC7.07□□□□□ -1.28
Sox3P53784 Gm18943-201ENSMUST00000207357 1216 ntBASIC7.07□□□□□ -1.28
Sox3P53784 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Sox3P53784 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC7.07□□□□□ -1.28
Sox3P53784 CT025685.1-201ENSMUST00000213716 150 ntBASIC7.07□□□□□ -1.28
Sox3P53784 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC7.07□□□□□ -1.28
Sox3P53784 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC7.07□□□□□ -1.28
Sox3P53784 Gm19161-201ENSMUST00000217958 737 ntBASIC7.07□□□□□ -1.28
Sox3P53784 AC154595.1-201ENSMUST00000225533 1059 ntBASIC7.07□□□□□ -1.28
Sox3P53784 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox3P53784 Gm9985-201ENSMUST00000044101 510 ntBASIC7.07□□□□□ -1.28
Sox3P53784 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox3P53784 Gpr87-201ENSMUST00000056898 1080 ntBASIC7.07□□□□□ -1.28
Sox3P53784 Gm5250-201ENSMUST00000059065 321 ntBASIC7.07□□□□□ -1.28
Sox3P53784 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox3P53784 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC7.07□□□□□ -1.28
Sox3P53784 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Sox3P53784 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Sox3P53784 Gm42595-201ENSMUST00000196771 1607 ntBASIC7.07□□□□□ -1.28
Sox3P53784 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC7.07□□□□□ -1.28
Sox3P53784 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms