Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Shmt1P50431 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC7.83□□□□□ -1.16
Shmt1P50431 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Shmt1P50431 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC7.83□□□□□ -1.16
Shmt1P50431 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC7.83□□□□□ -1.16
Shmt1P50431 Gm8046-201ENSMUST00000172151 616 ntBASIC7.83□□□□□ -1.16
Shmt1P50431 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC7.83□□□□□ -1.16
Shmt1P50431 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC7.83□□□□□ -1.16
Shmt1P50431 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC7.83□□□□□ -1.16
Shmt1P50431 Gm8305-201ENSMUST00000180022 1195 ntBASIC7.83□□□□□ -1.16
Shmt1P50431 Gm9381-201ENSMUST00000182285 1012 ntBASIC7.83□□□□□ -1.16
Shmt1P50431 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Shmt1P50431 Gm8004-201ENSMUST00000187782 617 ntBASIC7.83□□□□□ -1.16
Shmt1P50431 Gm6472-202ENSMUST00000187973 582 ntBASIC7.83□□□□□ -1.16
Shmt1P50431 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC7.83□□□□□ -1.16
Shmt1P50431 Gm38280-201ENSMUST00000192610 158 ntBASIC7.83□□□□□ -1.16
Shmt1P50431 Gm17965-201ENSMUST00000193904 517 ntBASIC7.83□□□□□ -1.16
Shmt1P50431 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC7.83□□□□□ -1.16
Shmt1P50431 Gm42734-201ENSMUST00000201656 878 ntBASIC7.83□□□□□ -1.16
Shmt1P50431 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC7.83□□□□□ -1.16
Shmt1P50431 Gm44845-201ENSMUST00000208773 335 ntBASIC7.83□□□□□ -1.16
Shmt1P50431 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC7.83□□□□□ -1.16
Shmt1P50431 AC158981.1-201ENSMUST00000226943 1205 ntBASIC7.83□□□□□ -1.16
Shmt1P50431 AC122309.1-201ENSMUST00000226945 421 ntBASIC7.83□□□□□ -1.16
Shmt1P50431 AC140451.1-201ENSMUST00000227984 737 ntBASIC7.83□□□□□ -1.16
Shmt1P50431 Il17f-201ENSMUST00000039046 1178 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Shmt1P50431 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Shmt1P50431 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Shmt1P50431 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Shmt1P50431 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
Shmt1P50431 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC7.83□□□□□ -1.16
Shmt1P50431 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Shmt1P50431 Nsun6-204ENSMUST00000114715 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Shmt1P50431 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
Shmt1P50431 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Shmt1P50431 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC7.83□□□□□ -1.16
Shmt1P50431 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Shmt1P50431 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Shmt1P50431 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Shmt1P50431 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Shmt1P50431 CR974429.2-201ENSMUST00000221883 1696 ntBASIC7.83□□□□□ -1.16
Shmt1P50431 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Shmt1P50431 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Shmt1P50431 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
Shmt1P50431 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Shmt1P50431 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC7.82□□□□□ -1.16
Shmt1P50431 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Shmt1P50431 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC7.82□□□□□ -1.16
Shmt1P50431 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Shmt1P50431 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Shmt1P50431 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Shmt1P50431 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC7.82□□□□□ -1.16
Shmt1P50431 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Shmt1P50431 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Shmt1P50431 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Shmt1P50431 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
Shmt1P50431 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Shmt1P50431 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Shmt1P50431 Gm13744-201ENSMUST00000118953 850 ntBASIC7.82□□□□□ -1.16
Shmt1P50431 Gm12601-201ENSMUST00000118994 846 ntBASIC7.82□□□□□ -1.16
Shmt1P50431 Gm11850-201ENSMUST00000119679 479 ntBASIC7.82□□□□□ -1.16
Shmt1P50431 Gm11371-201ENSMUST00000120294 385 ntBASIC7.82□□□□□ -1.16
Shmt1P50431 Gm5135-201ENSMUST00000121100 573 ntBASIC7.82□□□□□ -1.16
Shmt1P50431 Gm11263-201ENSMUST00000121853 749 ntBASIC7.82□□□□□ -1.16
Shmt1P50431 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Shmt1P50431 Gm22993-201ENSMUST00000175423 254 ntBASIC7.82□□□□□ -1.16
Shmt1P50431 Gm7481-201ENSMUST00000182020 995 ntBASIC7.82□□□□□ -1.16
Shmt1P50431 Mir6769b-201ENSMUST00000184793 60 ntBASIC7.82□□□□□ -1.16
Shmt1P50431 Gm28438-201ENSMUST00000188299 345 ntBASIC7.82□□□□□ -1.16
Shmt1P50431 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC7.82□□□□□ -1.16
Shmt1P50431 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC7.82□□□□□ -1.16
Shmt1P50431 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC7.82□□□□□ -1.16
Shmt1P50431 Gm29214-201ENSMUST00000190216 570 ntBASIC7.82□□□□□ -1.16
Shmt1P50431 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC7.82□□□□□ -1.16
Shmt1P50431 Gm36928-201ENSMUST00000192466 694 ntBASIC7.82□□□□□ -1.16
Shmt1P50431 Gm37325-201ENSMUST00000194971 694 ntBASIC7.82□□□□□ -1.16
Shmt1P50431 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC7.82□□□□□ -1.16
Shmt1P50431 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC7.82□□□□□ -1.16
Shmt1P50431 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC7.82□□□□□ -1.16
Shmt1P50431 Gm20136-201ENSMUST00000207501 891 ntBASIC7.82□□□□□ -1.16
Shmt1P50431 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Shmt1P50431 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Shmt1P50431 AC155834.1-201ENSMUST00000220033 498 ntBASIC7.82□□□□□ -1.16
Shmt1P50431 Gm5791-201ENSMUST00000220840 489 ntBASIC7.82□□□□□ -1.16
Shmt1P50431 CT025639.2-201ENSMUST00000224440 1220 ntBASIC7.82□□□□□ -1.16
Shmt1P50431 AV026068-229ENSMUST00000225516 595 ntBASIC7.82□□□□□ -1.16
Shmt1P50431 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Shmt1P50431 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC7.82□□□□□ -1.16
Shmt1P50431 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Shmt1P50431 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Shmt1P50431 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Shmt1P50431 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC7.82□□□□□ -1.16
Shmt1P50431 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Shmt1P50431 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Shmt1P50431 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Shmt1P50431 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC7.82□□□□□ -1.16
Shmt1P50431 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Shmt1P50431 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC7.82□□□□□ -1.16
Shmt1P50431 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC7.82□□□□□ -1.16
Shmt1P50431 CT025639.1-201ENSMUST00000223906 1375 ntBASIC7.82□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 167.1 ms