Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm45509-201ENSMUST00000209624 1229 ntBASIC6.85□□□□□ -1.31
Sox6P40645 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC6.85□□□□□ -1.31
Sox6P40645 Gm9289-201ENSMUST00000221269 606 ntBASIC6.85□□□□□ -1.31
Sox6P40645 Gm46379-201ENSMUST00000222551 265 ntBASIC6.85□□□□□ -1.31
Sox6P40645 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC6.85□□□□□ -1.31
Sox6P40645 AC158954.1-201ENSMUST00000228272 1006 ntBASIC6.85□□□□□ -1.31
Sox6P40645 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Sox6P40645 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC6.85□□□□□ -1.31
Sox6P40645 Mir135b-201ENSMUST00000083501 97 ntBASIC6.85□□□□□ -1.31
Sox6P40645 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC6.85□□□□□ -1.31
Sox6P40645 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox6P40645 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox6P40645 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox6P40645 Gm5084-202ENSMUST00000224064 3609 ntBASIC6.85□□□□□ -1.31
Sox6P40645 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC6.85□□□□□ -1.31
Sox6P40645 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
Sox6P40645 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC6.85□□□□□ -1.31
Sox6P40645 BC085271-201ENSMUST00000191852 1487 ntBASIC6.85□□□□□ -1.31
Sox6P40645 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox6P40645 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox6P40645 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Sox6P40645 AC124414.1-201ENSMUST00000218033 2946 ntBASIC6.84□□□□□ -1.31
Sox6P40645 Keg1-201ENSMUST00000025598 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Sox6P40645 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Sox6P40645 Gm43707-201ENSMUST00000196451 3187 ntBASIC6.84□□□□□ -1.31
Sox6P40645 Gm6350-201ENSMUST00000195099 1339 ntBASIC6.84□□□□□ -1.31
Sox6P40645 Gm43747-201ENSMUST00000201412 1330 ntBASIC6.84□□□□□ -1.31
Sox6P40645 Gm29670-201ENSMUST00000190228 2491 ntBASIC6.84□□□□□ -1.31
Sox6P40645 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Sox6P40645 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.84□□□□□ -1.31
Sox6P40645 Dtwd1-201ENSMUST00000110437 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Sox6P40645 Gm13858-201ENSMUST00000118862 671 ntBASIC6.84□□□□□ -1.31
Sox6P40645 Gm11259-201ENSMUST00000120554 715 ntBASIC6.84□□□□□ -1.31
Sox6P40645 Gm13622-201ENSMUST00000120658 433 ntBASIC6.84□□□□□ -1.31
Sox6P40645 Gm11474-201ENSMUST00000120814 277 ntBASIC6.84□□□□□ -1.31
Sox6P40645 Gm13828-201ENSMUST00000122278 363 ntBASIC6.84□□□□□ -1.31
Sox6P40645 Gm14380-201ENSMUST00000122298 431 ntBASIC6.84□□□□□ -1.31
Sox6P40645 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC6.84□□□□□ -1.31
Sox6P40645 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Sox6P40645 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC6.84□□□□□ -1.31
Sox6P40645 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Sox6P40645 Gm6838-201ENSMUST00000172851 582 ntBASIC6.84□□□□□ -1.31
Sox6P40645 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC6.84□□□□□ -1.31
Sox6P40645 Gm23945-201ENSMUST00000179609 92 ntBASIC6.84□□□□□ -1.31
Sox6P40645 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Sox6P40645 Mir7669-201ENSMUST00000183442 58 ntBASIC6.84□□□□□ -1.31
Sox6P40645 Mir8099-2-201ENSMUST00000183568 127 ntBASIC6.84□□□□□ -1.31
Sox6P40645 Mir8099-1-201ENSMUST00000184238 127 ntBASIC6.84□□□□□ -1.31
Sox6P40645 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Sox6P40645 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
Sox6P40645 Gm29195-201ENSMUST00000189038 379 ntBASIC6.84□□□□□ -1.31
Sox6P40645 Ighv1-38-201ENSMUST00000192755 349 ntBASIC6.84□□□□□ -1.31
Sox6P40645 Trbv9-201ENSMUST00000194494 290 ntBASIC6.84□□□□□ -1.31
Sox6P40645 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC6.84□□□□□ -1.31
Sox6P40645 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC6.84□□□□□ -1.31
Sox6P40645 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Sox6P40645 AC192091.1-201ENSMUST00000218668 439 ntBASIC6.84□□□□□ -1.31
Sox6P40645 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC6.84□□□□□ -1.31
Sox6P40645 Gm40853-201ENSMUST00000221342 582 ntBASIC6.84□□□□□ -1.31
Sox6P40645 Gm9255-201ENSMUST00000223225 581 ntBASIC6.84□□□□□ -1.31
Sox6P40645 Gm5815-201ENSMUST00000050706 1185 ntBASIC6.84□□□□□ -1.31
Sox6P40645 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Sox6P40645 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Sox6P40645 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Sox6P40645 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
Sox6P40645 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Sox6P40645 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Sox6P40645 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Sox6P40645 Gm43872-201ENSMUST00000203218 2213 ntBASIC6.84□□□□□ -1.32
Sox6P40645 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Sox6P40645 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.32
Sox6P40645 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox6P40645 Gm37530-201ENSMUST00000191759 4932 ntBASIC6.83□□□□□ -1.32
Sox6P40645 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox6P40645 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox6P40645 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Sox6P40645 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox6P40645 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Sox6P40645 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Sox6P40645 Gm44228-201ENSMUST00000204888 2026 ntBASIC6.83□□□□□ -1.32
Sox6P40645 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
Sox6P40645 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Sox6P40645 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC6.83□□□□□ -1.32
Sox6P40645 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Sox6P40645 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Sox6P40645 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Sox6P40645 Gm12072-201ENSMUST00000118293 715 ntBASIC6.83□□□□□ -1.32
Sox6P40645 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Sox6P40645 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC6.83□□□□□ -1.32
Sox6P40645 Gm24738-201ENSMUST00000158856 123 ntBASIC6.83□□□□□ -1.32
Sox6P40645 Gm9141-201ENSMUST00000159355 1007 ntBASIC6.83□□□□□ -1.32
Sox6P40645 Mir3072-201ENSMUST00000175610 83 ntBASIC6.83□□□□□ -1.32
Sox6P40645 Mir6940-201ENSMUST00000183447 70 ntBASIC6.83□□□□□ -1.32
Sox6P40645 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC6.83□□□□□ -1.32
Sox6P40645 Gm28728-201ENSMUST00000189087 405 ntBASIC6.83□□□□□ -1.32
Sox6P40645 Gm42161-201ENSMUST00000196278 726 ntTSL 5 BASIC6.83□□□□□ -1.32
Sox6P40645 Gm18131-201ENSMUST00000199241 449 ntBASIC6.83□□□□□ -1.32
Sox6P40645 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC6.83□□□□□ -1.32
Sox6P40645 Gm7542-201ENSMUST00000201140 777 ntBASIC6.83□□□□□ -1.32
Sox6P40645 AC163296.1-202ENSMUST00000218395 661 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms