Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Rad51ap1-201ENSMUST00000112220 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Nkx6-1Q99MA9 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC7.48□□□□□ -1.21
Nkx6-1Q99MA9 Lhfpl2-202ENSMUST00000118195 3611 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Nkx6-1Q99MA9 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Nkx6-1Q99MA9 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Nkx6-1Q99MA9 Pwwp2a-203ENSMUST00000109280 2739 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
Nkx6-1Q99MA9 Prom1-214ENSMUST00000197706 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Nkx6-1Q99MA9 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Nkx6-1Q99MA9 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Nkx6-1Q99MA9 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC7.48□□□□□ -1.21
Nkx6-1Q99MA9 Psg19-201ENSMUST00000004657 2105 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Nkx6-1Q99MA9 Acvr1-204ENSMUST00000112601 3050 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Nkx6-1Q99MA9 Nup107-202ENSMUST00000167943 3098 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Nkx6-1Q99MA9 Cherp-201ENSMUST00000079510 3713 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Nkx6-1Q99MA9 1700024J04Rik-201ENSMUST00000093146 1821 ntBASIC7.48□□□□□ -1.21
Nkx6-1Q99MA9 Tro-207ENSMUST00000163969 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Nkx6-1Q99MA9 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm5583-201ENSMUST00000174328 1519 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 CT030170.4-201ENSMUST00000221539 1538 ntTSL 5 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm26748-201ENSMUST00000180406 2972 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Ptpro-207ENSMUST00000203914 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Cd22-203ENSMUST00000186154 3819 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm38251-201ENSMUST00000192968 2575 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Zfp607b-201ENSMUST00000076421 1947 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 R3hdm2-204ENSMUST00000105250 3975 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm22470-201ENSMUST00000104117 130 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm14186-201ENSMUST00000120804 137 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm12096-201ENSMUST00000121149 829 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm12202-201ENSMUST00000121196 811 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm12517-201ENSMUST00000122082 425 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm25989-201ENSMUST00000158761 133 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm2959-201ENSMUST00000169844 621 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm8046-201ENSMUST00000172151 616 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm5973-201ENSMUST00000178542 496 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Ppp1r2-ps7-202ENSMUST00000185057 763 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm28958-201ENSMUST00000185864 703 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm28503-201ENSMUST00000185966 147 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm29356-201ENSMUST00000186935 373 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm38203-201ENSMUST00000191815 245 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm17530-201ENSMUST00000194336 472 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm30270-201ENSMUST00000202675 524 ntTSL 2 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm44931-201ENSMUST00000206056 545 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm44559-201ENSMUST00000207177 1012 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm45042-201ENSMUST00000207377 211 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm39121-201ENSMUST00000208847 525 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm7839-201ENSMUST00000210755 673 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm6667-201ENSMUST00000217169 564 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm18039-201ENSMUST00000217816 728 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm34304-201ENSMUST00000218927 1139 ntTSL 5 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 AC132237.2-201ENSMUST00000221702 1209 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 AC173482.2-201ENSMUST00000224044 750 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 AC162183.1-202ENSMUST00000225434 904 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 AC154634.2-201ENSMUST00000225983 1184 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 AC130547.1-201ENSMUST00000228079 1047 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Ttc16-201ENSMUST00000066478 2979 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm22575-201ENSMUST00000082981 110 ntBASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Nkx6-1Q99MA9 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 126.9 ms