Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Gm37618-201ENSMUST00000192891 3075 ntBASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Gm34294-201ENSMUST00000191912 4263 ntBASIC7.11□□□□□ -1.27
Cstf3Q99LI7 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Gm26357-201ENSMUST00000158218 115 ntBASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Gm5611-201ENSMUST00000164523 852 ntBASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Gm26197-201ENSMUST00000175033 115 ntBASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Mir8095-201ENSMUST00000185103 129 ntBASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Gm44471-201ENSMUST00000197963 100 ntBASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Gm42472-201ENSMUST00000201626 859 ntBASIC7.11□□□□□ -1.27
Cstf3Q99LI7 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 AC163623.2-202ENSMUST00000214165 610 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 AC137950.1-201ENSMUST00000228553 515 ntBASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Gm45512-201ENSMUST00000210432 1553 ntBASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cstf3Q99LI7 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Gm28583-201ENSMUST00000188903 2141 ntBASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 AC144772.2-201ENSMUST00000228830 2859 ntBASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Gm22660-201ENSMUST00000104193 130 ntBASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Gm9141-201ENSMUST00000159355 1007 ntBASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Gm20638-201ENSMUST00000175796 550 ntTSL 5 BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Gm28164-201ENSMUST00000190143 442 ntBASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Gm28239-201ENSMUST00000190225 447 ntBASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Gm38063-201ENSMUST00000193990 342 ntBASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Gm7285-201ENSMUST00000198801 580 ntBASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Gm7542-201ENSMUST00000201140 777 ntBASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Gm46379-201ENSMUST00000222551 265 ntBASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cstf3Q99LI7 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Cstf3Q99LI7 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms