Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 AC154642.1-201ENSMUST00000224173 740 ntBASIC9.51□□□□□ -0.89
Col16a1Q8BLX7 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col16a1Q8BLX7 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Col16a1Q8BLX7 Klhl1-201ENSMUST00000022666 6645 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col16a1Q8BLX7 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col16a1Q8BLX7 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
Col16a1Q8BLX7 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Col16a1Q8BLX7 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col16a1Q8BLX7 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col16a1Q8BLX7 Kif1b-201ENSMUST00000030806 6991 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Col16a1Q8BLX7 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col16a1Q8BLX7 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Col16a1Q8BLX7 D430042O09Rik-203ENSMUST00000124223 5874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col16a1Q8BLX7 Gm26575-201ENSMUST00000181714 2232 ntBASIC9.51□□□□□ -0.89
Col16a1Q8BLX7 Arhgef9-202ENSMUST00000113876 5342 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col16a1Q8BLX7 Zscan26-201ENSMUST00000032820 3918 ntTSL 3 BASIC9.51□□□□□ -0.89
Col16a1Q8BLX7 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col16a1Q8BLX7 Rims2-205ENSMUST00000227243 4760 ntAPPRIS ALT2 BASIC9.51□□□□□ -0.89
Col16a1Q8BLX7 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Col16a1Q8BLX7 Map4k4-215ENSMUST00000195259 3719 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col16a1Q8BLX7 Dapp1-201ENSMUST00000029806 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col16a1Q8BLX7 Luzp1-203ENSMUST00000105849 7438 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Col16a1Q8BLX7 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col16a1Q8BLX7 Lrat-201ENSMUST00000029632 5351 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col16a1Q8BLX7 Olfr169-204ENSMUST00000216070 2328 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Nlgn3-206ENSMUST00000151528 8541 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Scn2a-205ENSMUST00000200829 6348 ntAPPRIS ALT1 TSL 5 BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Gm12890-201ENSMUST00000120885 373 ntBASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Gm9504-201ENSMUST00000196322 468 ntBASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Gm44075-201ENSMUST00000204208 216 ntBASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 AC114572.1-201ENSMUST00000227262 300 ntBASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Gm24032-201ENSMUST00000083932 159 ntBASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Rbm12-202ENSMUST00000109604 6635 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Zc2hc1c-201ENSMUST00000059341 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Hivep2-201ENSMUST00000015645 9763 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Uhrf1-201ENSMUST00000001258 3586 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Wdr37-201ENSMUST00000021572 4526 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Dysf-204ENSMUST00000113821 6803 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Gm14375-201ENSMUST00000119490 855 ntBASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Gm14070-201ENSMUST00000120773 428 ntBASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Gm12920-201ENSMUST00000121818 1186 ntBASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Ralgps2-204ENSMUST00000172057 6863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Rps12l1-201ENSMUST00000183090 399 ntBASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Gm5711-201ENSMUST00000197896 421 ntBASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Gm44437-201ENSMUST00000203832 4038 ntBASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Gm4927-201ENSMUST00000219548 1318 ntBASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 CT009495.1-201ENSMUST00000224221 862 ntBASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Col16a1Q8BLX7 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Cdhr1-201ENSMUST00000022337 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Akap1-202ENSMUST00000107903 3721 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Col16a1Q8BLX7 Tns1-201ENSMUST00000169786 9966 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms