Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Usp48Q3V0C5 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Usp48Q3V0C5 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Usp48Q3V0C5 Gm6887-201ENSMUST00000080945 482 ntBASIC9.66□□□□□ -0.86
Usp48Q3V0C5 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Usp48Q3V0C5 Dgkh-206ENSMUST00000228362 3308 ntBASIC9.66□□□□□ -0.86
Usp48Q3V0C5 Slc16a7-201ENSMUST00000063318 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Usp48Q3V0C5 Retreg1-203ENSMUST00000226438 2783 ntBASIC9.66□□□□□ -0.86
Usp48Q3V0C5 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Usp48Q3V0C5 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Usp48Q3V0C5 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Usp48Q3V0C5 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Usp48Q3V0C5 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Gm19210-201ENSMUST00000199562 1350 ntBASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Gm23706-201ENSMUST00000104369 82 ntBASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Gm14098-201ENSMUST00000119295 623 ntBASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Gm4918-201ENSMUST00000119420 1084 ntBASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Gm12993-201ENSMUST00000119900 479 ntBASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Gm14369-201ENSMUST00000121355 285 ntBASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Gm12967-201ENSMUST00000122147 289 ntBASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Gm12055-201ENSMUST00000143643 793 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Gm23819-201ENSMUST00000158744 109 ntBASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC9.65□□□□□ -0.86
Usp48Q3V0C5 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Gm29355-201ENSMUST00000188178 697 ntBASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Gm28953-201ENSMUST00000188336 697 ntBASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Gm20788-201ENSMUST00000190538 697 ntBASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Gm37395-201ENSMUST00000194721 697 ntBASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Gm37987-201ENSMUST00000194999 825 ntBASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC9.65□□□□□ -0.86
Usp48Q3V0C5 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Usp48Q3V0C5 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC9.65□□□□□ -0.86
Usp48Q3V0C5 AC131117.2-202ENSMUST00000224539 547 ntBASIC9.65□□□□□ -0.86
Usp48Q3V0C5 CT030705.2-201ENSMUST00000225301 556 ntBASIC9.65□□□□□ -0.86
Usp48Q3V0C5 AC167013.3-201ENSMUST00000228110 989 ntBASIC9.65□□□□□ -0.86
Usp48Q3V0C5 AC102676.1-201ENSMUST00000228131 719 ntBASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Usp48Q3V0C5 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Mir455-201ENSMUST00000093594 82 ntBASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Muc19-202ENSMUST00000160242 9104 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Olfr156-204ENSMUST00000215406 1850 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Usp48Q3V0C5 1600012P17Rik-201ENSMUST00000062159 2475 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Fbxw10-201ENSMUST00000036085 3354 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Usp48Q3V0C5 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Usp48Q3V0C5 Zmym5-201ENSMUST00000039812 5290 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Usp48Q3V0C5 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Usp48Q3V0C5 Ankrd45-202ENSMUST00000111608 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Usp48Q3V0C5 Naa11-201ENSMUST00000060265 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Usp48Q3V0C5 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC9.65□□□□□ -0.87
Usp48Q3V0C5 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Gm36952-201ENSMUST00000194923 3625 ntBASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Gm43343-201ENSMUST00000202454 1926 ntBASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Tbc1d15-201ENSMUST00000020339 3752 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Gm8204-201ENSMUST00000185696 2144 ntBASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Olfr1198-202ENSMUST00000215179 3145 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Usp48Q3V0C5 AC139350.2-201ENSMUST00000226508 2331 ntBASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Gm24340-201ENSMUST00000104208 97 ntBASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Olfr639-201ENSMUST00000106862 1020 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Mir669e-201ENSMUST00000117003 119 ntBASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Gm11865-201ENSMUST00000118093 859 ntBASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Gm6491-201ENSMUST00000118273 990 ntBASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Gm11433-201ENSMUST00000118318 228 ntBASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Gm8051-201ENSMUST00000120464 466 ntBASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Gm13358-201ENSMUST00000121427 569 ntBASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Gm26069-201ENSMUST00000157497 277 ntBASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Gm5350-201ENSMUST00000182057 1002 ntBASIC9.64□□□□□ -0.87
Usp48Q3V0C5 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Gm5539-201ENSMUST00000192177 966 ntBASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Gm36974-201ENSMUST00000194200 1071 ntBASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Mir703-201ENSMUST00000197105 109 ntBASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Gm18598-201ENSMUST00000207724 597 ntBASIC9.64□□□□□ -0.87
Usp48Q3V0C5 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Usp48Q3V0C5 CT009527.2-201ENSMUST00000225386 606 ntBASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 98 ms