Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm27602-201ENSMUST00000183861 111 ntBASIC7.1□□□□□ -1.27
Sox3P53784 Gm29201-201ENSMUST00000189120 431 ntBASIC7.1□□□□□ -1.27
Sox3P53784 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC7.1□□□□□ -1.27
Sox3P53784 Gm8182-201ENSMUST00000197863 769 ntBASIC7.1□□□□□ -1.27
Sox3P53784 Gm43560-201ENSMUST00000198100 773 ntBASIC7.1□□□□□ -1.27
Sox3P53784 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC7.1□□□□□ -1.27
Sox3P53784 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC7.1□□□□□ -1.27
Sox3P53784 AC069561.1-201ENSMUST00000213750 424 ntBASIC7.1□□□□□ -1.27
Sox3P53784 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC7.1□□□□□ -1.27
Sox3P53784 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sox3P53784 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC7.1□□□□□ -1.27
Sox3P53784 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Sox3P53784 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Sox3P53784 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sox3P53784 Gm20302-201ENSMUST00000080671 275 ntBASIC7.1□□□□□ -1.27
Sox3P53784 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sox3P53784 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sox3P53784 Gm19028-201ENSMUST00000189614 1873 ntBASIC7.1□□□□□ -1.27
Sox3P53784 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC7.1□□□□□ -1.27
Sox3P53784 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC7.1□□□□□ -1.27
Sox3P53784 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sox3P53784 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC7.1□□□□□ -1.27
Sox3P53784 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Sox3P53784 Gm21043-201ENSMUST00000199316 1517 ntBASIC7.1□□□□□ -1.27
Sox3P53784 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC7.1□□□□□ -1.27
Sox3P53784 Gm37877-201ENSMUST00000191630 2709 ntBASIC7.1□□□□□ -1.27
Sox3P53784 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Sox3P53784 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
Sox3P53784 Gm6493-201ENSMUST00000159889 1786 ntBASIC7.1□□□□□ -1.27
Sox3P53784 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
Sox3P53784 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC7.1□□□□□ -1.27
Sox3P53784 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sox3P53784 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Sox3P53784 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Sox3P53784 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Sox3P53784 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Sox3P53784 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Sox3P53784 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC7.1□□□□□ -1.27
Sox3P53784 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sox3P53784 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sox3P53784 Gm43339-201ENSMUST00000200032 1606 ntBASIC7.09□□□□□ -1.27
Sox3P53784 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sox3P53784 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sox3P53784 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC7.09□□□□□ -1.27
Sox3P53784 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sox3P53784 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sox3P53784 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sox3P53784 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sox3P53784 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC7.09□□□□□ -1.27
Sox3P53784 Gm15209-201ENSMUST00000117703 400 ntBASIC7.09□□□□□ -1.27
Sox3P53784 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
Sox3P53784 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC7.09□□□□□ -1.27
Sox3P53784 Gm42775-201ENSMUST00000198407 740 ntTSL 3 BASIC7.09□□□□□ -1.27
Sox3P53784 Gm4870-201ENSMUST00000198525 1251 ntBASIC7.09□□□□□ -1.27
Sox3P53784 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Sox3P53784 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC7.09□□□□□ -1.27
Sox3P53784 Gm45394-201ENSMUST00000209240 1175 ntBASIC7.09□□□□□ -1.27
Sox3P53784 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC7.09□□□□□ -1.27
Sox3P53784 AC241621.1-201ENSMUST00000224499 430 ntBASIC7.09□□□□□ -1.27
Sox3P53784 AC154461.4-201ENSMUST00000224878 468 ntBASIC7.09□□□□□ -1.27
Sox3P53784 CT009733.1-202ENSMUST00000224941 441 ntBASIC7.09□□□□□ -1.27
Sox3P53784 AC099629.1-201ENSMUST00000226778 464 ntBASIC7.09□□□□□ -1.27
Sox3P53784 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC7.09□□□□□ -1.27
Sox3P53784 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Sox3P53784 Gm22581-201ENSMUST00000083735 136 ntBASIC7.09□□□□□ -1.27
Sox3P53784 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC7.09□□□□□ -1.27
Sox3P53784 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC7.09□□□□□ -1.27
Sox3P53784 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Sox3P53784 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
Sox3P53784 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Sox3P53784 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Sox3P53784 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC7.09□□□□□ -1.27
Sox3P53784 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sox3P53784 Gm14373-201ENSMUST00000122467 2158 ntBASIC7.09□□□□□ -1.27
Sox3P53784 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
Sox3P53784 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
Sox3P53784 Gm38014-201ENSMUST00000193349 2612 ntBASIC7.09□□□□□ -1.27
Sox3P53784 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
Sox3P53784 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Sox3P53784 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
Sox3P53784 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Sox3P53784 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox3P53784 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Sox3P53784 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox3P53784 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox3P53784 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox3P53784 Gm13301-201ENSMUST00000121728 2446 ntBASIC7.08□□□□□ -1.28
Sox3P53784 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Sox3P53784 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Sox3P53784 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Sox3P53784 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox3P53784 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox3P53784 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
Sox3P53784 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Sox3P53784 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox3P53784 Gm11799-201ENSMUST00000116110 460 ntBASIC7.08□□□□□ -1.28
Sox3P53784 Gm14279-201ENSMUST00000117142 332 ntBASIC7.08□□□□□ -1.28
Sox3P53784 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC7.08□□□□□ -1.28
Sox3P53784 Gm10243-201ENSMUST00000117571 333 ntBASIC7.08□□□□□ -1.28
Sox3P53784 Gm11810-201ENSMUST00000118311 333 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms