Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm45358-201ENSMUST00000209492 2305 ntBASIC6.61□□□□□ -1.35
Rfx3P48381 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Rfx3P48381 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx3P48381 Gm6729-201ENSMUST00000165173 1452 ntBASIC6.61□□□□□ -1.35
Rfx3P48381 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx3P48381 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx3P48381 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx3P48381 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx3P48381 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx3P48381 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx3P48381 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC6.61□□□□□ -1.35
Rfx3P48381 Gm22660-201ENSMUST00000104193 130 ntBASIC6.61□□□□□ -1.35
Rfx3P48381 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx3P48381 Gm13858-201ENSMUST00000118862 671 ntBASIC6.61□□□□□ -1.35
Rfx3P48381 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC6.61□□□□□ -1.35
Rfx3P48381 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC6.61□□□□□ -1.35
Rfx3P48381 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC6.61□□□□□ -1.35
Rfx3P48381 Mir1962-201ENSMUST00000157516 121 ntBASIC6.61□□□□□ -1.35
Rfx3P48381 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC6.61□□□□□ -1.35
Rfx3P48381 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC6.61□□□□□ -1.35
Rfx3P48381 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx3P48381 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Rfx3P48381 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC6.61□□□□□ -1.35
Rfx3P48381 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx3P48381 Mir8099-2-201ENSMUST00000183568 127 ntBASIC6.61□□□□□ -1.35
Rfx3P48381 Mir8099-1-201ENSMUST00000184238 127 ntBASIC6.61□□□□□ -1.35
Rfx3P48381 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx3P48381 Gm38203-201ENSMUST00000191815 245 ntBASIC6.61□□□□□ -1.35
Rfx3P48381 Gm38078-201ENSMUST00000192771 392 ntBASIC6.61□□□□□ -1.35
Rfx3P48381 Gm8925-201ENSMUST00000197212 763 ntBASIC6.61□□□□□ -1.35
Rfx3P48381 Gm26413-202ENSMUST00000198972 127 ntBASIC6.61□□□□□ -1.35
Rfx3P48381 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC6.61□□□□□ -1.35
Rfx3P48381 Gm43479-201ENSMUST00000200801 529 ntTSL 2 BASIC6.61□□□□□ -1.35
Rfx3P48381 Gm45432-201ENSMUST00000210391 416 ntBASIC6.61□□□□□ -1.35
Rfx3P48381 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Rfx3P48381 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx3P48381 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx3P48381 Gm6807-201ENSMUST00000077435 888 ntBASIC6.61□□□□□ -1.35
Rfx3P48381 Mir135b-201ENSMUST00000083501 97 ntBASIC6.61□□□□□ -1.35
Rfx3P48381 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx3P48381 Olfr742-201ENSMUST00000089836 1120 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Rfx3P48381 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx3P48381 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC6.61□□□□□ -1.35
Rfx3P48381 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC6.61□□□□□ -1.35
Rfx3P48381 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC6.61□□□□□ -1.35
Rfx3P48381 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Rfx3P48381 Gm38147-201ENSMUST00000192397 1798 ntBASIC6.61□□□□□ -1.35
Rfx3P48381 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC6.61□□□□□ -1.35
Rfx3P48381 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx3P48381 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC6.61□□□□□ -1.35
Rfx3P48381 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC6.61□□□□□ -1.35
Rfx3P48381 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx3P48381 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx3P48381 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Rfx3P48381 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx3P48381 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Rfx3P48381 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx3P48381 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx3P48381 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx3P48381 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rfx3P48381 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rfx3P48381 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rfx3P48381 AC159264.1-201ENSMUST00000224844 4257 ntBASIC6.6□□□□□ -1.35
Rfx3P48381 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
Rfx3P48381 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rfx3P48381 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Rfx3P48381 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Rfx3P48381 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Rfx3P48381 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
Rfx3P48381 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC6.6□□□□□ -1.35
Rfx3P48381 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Rfx3P48381 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC6.6□□□□□ -1.35
Rfx3P48381 Gm26197-201ENSMUST00000175033 115 ntBASIC6.6□□□□□ -1.35
Rfx3P48381 Gm25692-201ENSMUST00000175444 125 ntBASIC6.6□□□□□ -1.35
Rfx3P48381 Gm7763-201ENSMUST00000182220 1006 ntBASIC6.6□□□□□ -1.35
Rfx3P48381 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rfx3P48381 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Rfx3P48381 Gm7436-201ENSMUST00000187229 391 ntBASIC6.6□□□□□ -1.35
Rfx3P48381 Gm9451-201ENSMUST00000188491 604 ntBASIC6.6□□□□□ -1.35
Rfx3P48381 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC6.6□□□□□ -1.35
Rfx3P48381 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
Rfx3P48381 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC6.6□□□□□ -1.35
Rfx3P48381 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC6.6□□□□□ -1.35
Rfx3P48381 Gm22149-202ENSMUST00000196259 137 ntBASIC6.6□□□□□ -1.35
Rfx3P48381 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Rfx3P48381 AC163623.2-202ENSMUST00000214165 610 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Rfx3P48381 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Rfx3P48381 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Rfx3P48381 AC163038.4-201ENSMUST00000224942 474 ntBASIC6.6□□□□□ -1.35
Rfx3P48381 AC134414.1-201ENSMUST00000228499 1221 ntBASIC6.6□□□□□ -1.35
Rfx3P48381 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Rfx3P48381 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC6.6□□□□□ -1.35
Rfx3P48381 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Rfx3P48381 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC6.6□□□□□ -1.35
Rfx3P48381 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC6.6□□□□□ -1.35
Rfx3P48381 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rfx3P48381 Gm37984-201ENSMUST00000191641 3733 ntBASIC6.6□□□□□ -1.35
Rfx3P48381 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC6.6□□□□□ -1.35
Rfx3P48381 Dram2-203ENSMUST00000121034 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Rfx3P48381 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 100.6 ms