Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
P20040 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
P20040 Gm8524-201ENSMUST00000186232 379 ntBASIC6.5□□□□□ -1.37
P20040 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC6.5□□□□□ -1.37
P20040 Gm37729-201ENSMUST00000194761 1172 ntBASIC6.5□□□□□ -1.37
P20040 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
P20040 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC6.5□□□□□ -1.37
P20040 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC6.5□□□□□ -1.37
P20040 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC6.5□□□□□ -1.37
P20040 Gm19011-201ENSMUST00000221777 808 ntBASIC6.5□□□□□ -1.37
P20040 AC157571.1-201ENSMUST00000222014 520 ntBASIC6.5□□□□□ -1.37
P20040 Mif-ps7-201ENSMUST00000223357 327 ntBASIC6.5□□□□□ -1.37
P20040 AC139323.1-201ENSMUST00000223370 1040 ntBASIC6.5□□□□□ -1.37
P20040 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
P20040 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
P20040 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC6.5□□□□□ -1.37
P20040 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
P20040 Snora9-201ENSMUST00000082579 133 ntBASIC6.5□□□□□ -1.37
P20040 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
P20040 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
P20040 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
P20040 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
P20040 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC6.5□□□□□ -1.37
P20040 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
P20040 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
P20040 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
P20040 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
P20040 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
P20040 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
P20040 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC6.49□□□□□ -1.37
P20040 Gm15681-201ENSMUST00000137501 2704 ntBASIC6.49□□□□□ -1.37
P20040 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
P20040 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
P20040 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
P20040 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
P20040 CT009757.6-201ENSMUST00000220661 2312 ntBASIC6.49□□□□□ -1.37
P20040 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
P20040 Gm6640-201ENSMUST00000120629 1587 ntBASIC6.49□□□□□ -1.37
P20040 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
P20040 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
P20040 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
P20040 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
P20040 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
P20040 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
P20040 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
P20040 Gm25725-201ENSMUST00000104528 130 ntBASIC6.49□□□□□ -1.37
P20040 Gm13988-201ENSMUST00000119363 288 ntBASIC6.49□□□□□ -1.37
P20040 Gm14053-201ENSMUST00000121662 470 ntBASIC6.49□□□□□ -1.37
P20040 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC6.49□□□□□ -1.37
P20040 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC6.49□□□□□ -1.37
P20040 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC6.49□□□□□ -1.37
P20040 Mir1983-201ENSMUST00000157523 132 ntBASIC6.49□□□□□ -1.37
P20040 Gm24530-201ENSMUST00000157948 288 ntBASIC6.49□□□□□ -1.37
P20040 Gm26784-201ENSMUST00000181666 410 ntBASIC6.49□□□□□ -1.37
P20040 Mir7011-201ENSMUST00000183768 73 ntBASIC6.49□□□□□ -1.37
P20040 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
P20040 Gm8004-201ENSMUST00000187782 617 ntBASIC6.49□□□□□ -1.37
P20040 Gm38203-201ENSMUST00000191815 245 ntBASIC6.49□□□□□ -1.37
P20040 Gm9723-201ENSMUST00000192100 457 ntBASIC6.49□□□□□ -1.37
P20040 Gm6197-201ENSMUST00000192273 454 ntBASIC6.49□□□□□ -1.37
P20040 Gm37481-201ENSMUST00000195176 403 ntBASIC6.49□□□□□ -1.37
P20040 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC6.49□□□□□ -1.37
P20040 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC6.49□□□□□ -1.37
P20040 Gm18469-201ENSMUST00000208850 439 ntBASIC6.49□□□□□ -1.37
P20040 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
P20040 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
P20040 Gm40853-201ENSMUST00000221342 582 ntBASIC6.49□□□□□ -1.37
P20040 Gm9255-201ENSMUST00000223225 581 ntBASIC6.49□□□□□ -1.37
P20040 Zfp874a-208ENSMUST00000225479 1092 ntBASIC6.49□□□□□ -1.37
P20040 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
P20040 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
P20040 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
P20040 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
P20040 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
P20040 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
P20040 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC6.49□□□□□ -1.37
P20040 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
P20040 AC166341.5-201ENSMUST00000222206 1400 ntBASIC6.49□□□□□ -1.37
P20040 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
P20040 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
P20040 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
P20040 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
P20040 Gm37077-201ENSMUST00000195723 3691 ntBASIC6.48□□□□□ -1.37
P20040 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
P20040 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
P20040 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
P20040 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
P20040 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
P20040 3110099E03Rik-203ENSMUST00000143695 1353 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
P20040 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
P20040 Gm14891-201ENSMUST00000117378 596 ntBASIC6.48□□□□□ -1.37
P20040 Gm11245-201ENSMUST00000119419 1037 ntBASIC6.48□□□□□ -1.37
P20040 Gm13828-201ENSMUST00000122278 363 ntBASIC6.48□□□□□ -1.37
P20040 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
P20040 Gm22687-201ENSMUST00000158301 105 ntBASIC6.48□□□□□ -1.37
P20040 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
P20040 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
P20040 Gm9286-201ENSMUST00000173586 508 ntBASIC6.48□□□□□ -1.37
P20040 Gm23945-201ENSMUST00000179609 92 ntBASIC6.48□□□□□ -1.37
P20040 Gm21181-201ENSMUST00000186249 330 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms