Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Scn3aA2ASI5 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC8.11□□□□□ -1.11
Scn3aA2ASI5 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC8.11□□□□□ -1.11
Scn3aA2ASI5 Cdip1-201ENSMUST00000004173 3953 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Scn3aA2ASI5 Map3k19-205ENSMUST00000208183 4865 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Scn3aA2ASI5 Cyld-201ENSMUST00000043526 8022 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Scn3aA2ASI5 Ctnnd1-212ENSMUST00000111686 6061 ntTSL 5 BASIC8.11□□□□□ -1.11
Scn3aA2ASI5 Gm8812-201ENSMUST00000118496 412 ntBASIC8.11□□□□□ -1.11
Scn3aA2ASI5 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC8.11□□□□□ -1.11
Scn3aA2ASI5 BC064078-201ENSMUST00000122939 570 ntBASIC8.11□□□□□ -1.11
Scn3aA2ASI5 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC8.11□□□□□ -1.11
Scn3aA2ASI5 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Scn3aA2ASI5 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC8.11□□□□□ -1.11
Scn3aA2ASI5 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Scn3aA2ASI5 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC8.11□□□□□ -1.11
Scn3aA2ASI5 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Scn3aA2ASI5 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Scn3aA2ASI5 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Scn3aA2ASI5 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Scn3aA2ASI5 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Scn3aA2ASI5 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Scn3aA2ASI5 AC133958.1-201ENSMUST00000227085 961 ntBASIC8.11□□□□□ -1.11
Scn3aA2ASI5 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Scn3aA2ASI5 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Scn3aA2ASI5 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Scn3aA2ASI5 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC8.11□□□□□ -1.11
Scn3aA2ASI5 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Mycbp2-201ENSMUST00000159855 15233 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 AC159193.3-201ENSMUST00000221902 2622 ntBASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Gm37496-201ENSMUST00000191930 2509 ntBASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Rtel1-203ENSMUST00000098971 4307 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Sdk2-201ENSMUST00000041627 11287 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Gm28906-201ENSMUST00000191371 1779 ntBASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Gas7-204ENSMUST00000108682 7067 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Gm37995-201ENSMUST00000194958 1714 ntBASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 CT009604.1-201ENSMUST00000223900 1328 ntBASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Gm25395-201ENSMUST00000157343 272 ntBASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Mir5617-201ENSMUST00000176786 57 ntBASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Gm17834-201ENSMUST00000204322 891 ntBASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Gm10126-201ENSMUST00000221732 168 ntBASIC8.1□□□□□ -1.11
Scn3aA2ASI5 AC159267.1-201ENSMUST00000226702 678 ntBASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Gm37080-201ENSMUST00000194804 2404 ntBASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Zkscan1-201ENSMUST00000019660 8261 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Retreg1-203ENSMUST00000226438 2783 ntBASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Sorbs1-211ENSMUST00000224667 4313 ntAPPRIS ALT2 BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Scn3aA2ASI5 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Gm22275-201ENSMUST00000122470 310 ntBASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Gm22262-201ENSMUST00000158713 86 ntBASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Gm22642-201ENSMUST00000175352 252 ntBASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Gm8245-201ENSMUST00000182434 987 ntBASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Gm6931-201ENSMUST00000183103 371 ntBASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Gm19480-201ENSMUST00000185547 667 ntBASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Gm9357-201ENSMUST00000207138 805 ntBASIC8.09□□□□□ -1.11
Scn3aA2ASI5 AC164294.1-201ENSMUST00000224682 688 ntBASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Gm45737-201ENSMUST00000208344 1612 ntBASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Gm43123-201ENSMUST00000201893 3471 ntBASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Scn3aA2ASI5 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms