Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gem-201ENSMUST00000029868 1994 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm40603-202ENSMUST00000219975 1642 ntTSL 5 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm13607-201ENSMUST00000117875 539 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm4914-201ENSMUST00000119757 459 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm11420-201ENSMUST00000120047 402 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm11604-201ENSMUST00000121487 742 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm11910-201ENSMUST00000121624 432 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm5398-201ENSMUST00000121933 984 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm12989-201ENSMUST00000122331 731 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm11707-201ENSMUST00000150366 490 ntTSL 3 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Glyatl3-201ENSMUST00000166343 873 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Ly6g6c-203ENSMUST00000174876 723 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Rab26os-201ENSMUST00000176215 477 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm20918-201ENSMUST00000179629 684 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm27353-201ENSMUST00000184712 122 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm28489-201ENSMUST00000186655 316 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm29142-201ENSMUST00000188009 696 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm28508-201ENSMUST00000188016 696 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm18181-201ENSMUST00000190670 736 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm28588-201ENSMUST00000191581 796 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm6558-202ENSMUST00000192046 180 ntTSL 5 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm3745-201ENSMUST00000193773 421 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm10522-201ENSMUST00000194503 1163 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Ighv1-65-201ENSMUST00000198790 349 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm42441-201ENSMUST00000199778 748 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm19254-201ENSMUST00000204828 294 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Rps11-204ENSMUST00000211725 493 ntTSL 5 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm8804-201ENSMUST00000212292 798 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm45866-201ENSMUST00000212425 326 ntTSL 3 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 AC025913.1-202ENSMUST00000220385 824 ntTSL 5 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 AC139381.1-201ENSMUST00000224215 478 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 AC162183.1-202ENSMUST00000225434 904 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 CT571256.1-201ENSMUST00000226045 585 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 AC131997.2-201ENSMUST00000227452 362 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 AC144628.1-201ENSMUST00000227943 466 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 AC114585.2-203ENSMUST00000228400 339 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm9788-201ENSMUST00000057038 906 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Olfr480-201ENSMUST00000071658 1029 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Ocln-202ENSMUST00000069756 4052 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm43528-201ENSMUST00000199492 1674 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 2010109I03Rik-201ENSMUST00000077004 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm15834-201ENSMUST00000129740 2097 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm7942-201ENSMUST00000163216 1500 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Hdhd2-208ENSMUST00000148955 3069 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Lipc-201ENSMUST00000034731 1920 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Snhg14-206ENSMUST00000187666 2517 ntTSL 5 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 4930546K05Rik-202ENSMUST00000216586 3539 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 AC100590.1-201ENSMUST00000220318 1357 ntTSL 5 BASIC7.71□□□□□ -1.17
Trim39Q9ESN2 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Trim39Q9ESN2 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
Trim39Q9ESN2 Zscan26-202ENSMUST00000110485 4366 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Trim39Q9ESN2 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
Trim39Q9ESN2 Ablim3-202ENSMUST00000166783 4213 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Trim39Q9ESN2 Khdc1b-201ENSMUST00000147615 2236 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Trim39Q9ESN2 Gm17034-201ENSMUST00000168990 2229 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Trim39Q9ESN2 Tbata-204ENSMUST00000122261 1431 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
Trim39Q9ESN2 Gm33543-202ENSMUST00000210336 1428 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
Trim39Q9ESN2 Gm44777-201ENSMUST00000205941 4052 ntBASIC7.71□□□□□ -1.17
Trim39Q9ESN2 Naa20-204ENSMUST00000134759 1883 ntTSL 2 BASIC7.71□□□□□ -1.18
Trim39Q9ESN2 Scn3b-201ENSMUST00000049941 4150 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trim39Q9ESN2 Gm43331-201ENSMUST00000197991 1689 ntBASIC7.71□□□□□ -1.18
Trim39Q9ESN2 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC7.71□□□□□ -1.18
Trim39Q9ESN2 Gm12310-201ENSMUST00000118013 492 ntBASIC7.71□□□□□ -1.18
Trim39Q9ESN2 Gm5387-201ENSMUST00000119776 857 ntBASIC7.71□□□□□ -1.18
Trim39Q9ESN2 Gm13720-201ENSMUST00000120741 196 ntBASIC7.71□□□□□ -1.18
Trim39Q9ESN2 Gm14609-201ENSMUST00000122176 902 ntBASIC7.71□□□□□ -1.18
Trim39Q9ESN2 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC7.71□□□□□ -1.18
Trim39Q9ESN2 Gm24298-201ENSMUST00000158299 60 ntBASIC7.71□□□□□ -1.18
Trim39Q9ESN2 Gm16301-201ENSMUST00000161959 295 ntBASIC7.71□□□□□ -1.18
Trim39Q9ESN2 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trim39Q9ESN2 Gm23186-201ENSMUST00000180078 107 ntBASIC7.71□□□□□ -1.18
Trim39Q9ESN2 Gm27149-201ENSMUST00000184716 1266 ntBASIC7.71□□□□□ -1.18
Trim39Q9ESN2 Gm5334-201ENSMUST00000187472 720 ntBASIC7.71□□□□□ -1.18
Trim39Q9ESN2 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC7.71□□□□□ -1.18
Trim39Q9ESN2 1700009C05Rik-201ENSMUST00000191101 788 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Trim39Q9ESN2 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC7.71□□□□□ -1.18
Trim39Q9ESN2 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
Trim39Q9ESN2 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC7.71□□□□□ -1.18
Trim39Q9ESN2 Gm44767-201ENSMUST00000206634 469 ntTSL 5 BASIC7.71□□□□□ -1.18
Trim39Q9ESN2 Gm18599-201ENSMUST00000206729 1125 ntBASIC7.71□□□□□ -1.18
Trim39Q9ESN2 Gm3854-201ENSMUST00000207173 2950 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Trim39Q9ESN2 AC124577.1-201ENSMUST00000214044 487 ntBASIC7.71□□□□□ -1.18
Trim39Q9ESN2 Olfr572-202ENSMUST00000214096 1126 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 108.5 ms