Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm37536-201ENSMUST00000194710 2491 ntBASIC9.44□□□□□ -0.9
RtcbQ99LF4 Kif3c-204ENSMUST00000219895 2962 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Perm1-201ENSMUST00000105572 3901 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Tma16-201ENSMUST00000026681 4328 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Fam227a-203ENSMUST00000109648 5187 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Bivm-202ENSMUST00000114709 3570 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
RtcbQ99LF4 Ank3-219ENSMUST00000182437 3113 ntTSL 5 BASIC9.43□□□□□ -0.9
RtcbQ99LF4 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
RtcbQ99LF4 Gm42897-201ENSMUST00000201486 2112 ntBASIC9.43□□□□□ -0.9
RtcbQ99LF4 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
RtcbQ99LF4 Ces3a-202ENSMUST00000093223 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
RtcbQ99LF4 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
RtcbQ99LF4 Gm18537-202ENSMUST00000206215 1503 ntBASIC9.43□□□□□ -0.9
RtcbQ99LF4 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
RtcbQ99LF4 Rad21-201ENSMUST00000022927 3956 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
RtcbQ99LF4 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
RtcbQ99LF4 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
RtcbQ99LF4 Gm24057-201ENSMUST00000158616 302 ntBASIC9.43□□□□□ -0.9
RtcbQ99LF4 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
RtcbQ99LF4 Gm7412-201ENSMUST00000191692 605 ntBASIC9.43□□□□□ -0.9
RtcbQ99LF4 Gm37932-201ENSMUST00000192258 1167 ntBASIC9.43□□□□□ -0.9
RtcbQ99LF4 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC9.43□□□□□ -0.9
RtcbQ99LF4 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC9.43□□□□□ -0.9
RtcbQ99LF4 Gm43748-201ENSMUST00000202329 1233 ntBASIC9.43□□□□□ -0.9
RtcbQ99LF4 Gm34583-203ENSMUST00000202586 454 ntBASIC9.43□□□□□ -0.9
RtcbQ99LF4 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC9.43□□□□□ -0.9
RtcbQ99LF4 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC9.43□□□□□ -0.9
RtcbQ99LF4 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
RtcbQ99LF4 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC9.43□□□□□ -0.9
RtcbQ99LF4 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
RtcbQ99LF4 Gm10123-201ENSMUST00000075723 490 ntBASIC9.43□□□□□ -0.9
RtcbQ99LF4 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
RtcbQ99LF4 Srbd1-201ENSMUST00000095187 3530 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
RtcbQ99LF4 Myh10-201ENSMUST00000018887 7667 ntTSL 5 BASIC9.43□□□□□ -0.9
RtcbQ99LF4 Def8-204ENSMUST00000108830 3191 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
RtcbQ99LF4 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
RtcbQ99LF4 Gm42811-201ENSMUST00000201951 2768 ntBASIC9.43□□□□□ -0.9
RtcbQ99LF4 Fancl-201ENSMUST00000004120 2724 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
RtcbQ99LF4 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
RtcbQ99LF4 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC9.43□□□□□ -0.9
RtcbQ99LF4 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
RtcbQ99LF4 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
RtcbQ99LF4 Ank3-231ENSMUST00000182884 9963 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
RtcbQ99LF4 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
RtcbQ99LF4 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
RtcbQ99LF4 Sycp1-202ENSMUST00000196988 3189 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Gm10388-201ENSMUST00000205001 2936 ntBASIC9.42□□□□□ -0.9
RtcbQ99LF4 Scn3b-202ENSMUST00000114956 4045 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Mlip-210ENSMUST00000184322 2668 ntTSL 5 BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Gpatch2-208ENSMUST00000160570 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Gm42546-201ENSMUST00000201584 2592 ntBASIC9.42□□□□□ -0.9
RtcbQ99LF4 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Olfr1350-202ENSMUST00000207221 1521 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Gm42656-201ENSMUST00000201506 2305 ntBASIC9.42□□□□□ -0.9
RtcbQ99LF4 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Cdh23-202ENSMUST00000105461 11096 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Slc1a7-201ENSMUST00000106713 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Gm12653-201ENSMUST00000117778 561 ntBASIC9.42□□□□□ -0.9
RtcbQ99LF4 Anp32-ps-201ENSMUST00000118265 388 ntBASIC9.42□□□□□ -0.9
RtcbQ99LF4 Gm15644-201ENSMUST00000121764 387 ntBASIC9.42□□□□□ -0.9
RtcbQ99LF4 Gm12634-201ENSMUST00000122157 992 ntBASIC9.42□□□□□ -0.9
RtcbQ99LF4 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Ppp1r9a-204ENSMUST00000168998 2966 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Gm8046-201ENSMUST00000172151 616 ntBASIC9.42□□□□□ -0.9
RtcbQ99LF4 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Gm25617-201ENSMUST00000179548 133 ntBASIC9.42□□□□□ -0.9
RtcbQ99LF4 Mir7084-201ENSMUST00000183876 70 ntBASIC9.42□□□□□ -0.9
RtcbQ99LF4 Gm18797-201ENSMUST00000190809 1174 ntBASIC9.42□□□□□ -0.9
RtcbQ99LF4 Gm37383-201ENSMUST00000191750 745 ntBASIC9.42□□□□□ -0.9
RtcbQ99LF4 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Gm25617-202ENSMUST00000198387 132 ntBASIC9.42□□□□□ -0.9
RtcbQ99LF4 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC9.42□□□□□ -0.9
RtcbQ99LF4 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Gm2691-201ENSMUST00000203205 901 ntBASIC9.42□□□□□ -0.9
RtcbQ99LF4 Gm44603-201ENSMUST00000206820 367 ntBASIC9.42□□□□□ -0.9
RtcbQ99LF4 AC159476.2-201ENSMUST00000216221 418 ntBASIC9.42□□□□□ -0.9
RtcbQ99LF4 Wdr48-208ENSMUST00000217472 2997 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
RtcbQ99LF4 AC192091.1-201ENSMUST00000218668 439 ntBASIC9.42□□□□□ -0.9
RtcbQ99LF4 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC9.42□□□□□ -0.9
RtcbQ99LF4 AC108947.1-201ENSMUST00000224274 1000 ntBASIC9.42□□□□□ -0.9
RtcbQ99LF4 AC110176.1-201ENSMUST00000226219 504 ntBASIC9.42□□□□□ -0.9
RtcbQ99LF4 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Olfr161-202ENSMUST00000216259 7133 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Gm10600-201ENSMUST00000117202 2047 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms