Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Gm44553-201ENSMUST00000206316 2037 ntBASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Gm26014-201ENSMUST00000104405 132 ntBASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Gm15913-201ENSMUST00000118492 331 ntBASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Gm11838-201ENSMUST00000121999 231 ntBASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Gm26197-201ENSMUST00000175033 115 ntBASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Mir6239-201ENSMUST00000183564 105 ntBASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Gm37506-201ENSMUST00000192008 143 ntBASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Gm17965-201ENSMUST00000193904 517 ntBASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Gm7762-201ENSMUST00000220595 604 ntTSL 3 BASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Gm18619-201ENSMUST00000222722 1147 ntBASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 AC140208.1-201ENSMUST00000226609 285 ntBASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 AC152394.1-201ENSMUST00000227360 1086 ntBASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Mir484-201ENSMUST00000093566 67 ntBASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Gm44021-201ENSMUST00000203055 3516 ntBASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Gm42874-201ENSMUST00000198888 1774 ntBASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 CT030185.1-201ENSMUST00000222940 2289 ntBASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Gm37685-201ENSMUST00000193507 2177 ntBASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Gm11945-201ENSMUST00000120551 476 ntBASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Gm12632-201ENSMUST00000121223 495 ntBASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Gm23822-201ENSMUST00000158739 128 ntBASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Gm6428-201ENSMUST00000161062 345 ntBASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Gm5611-201ENSMUST00000164523 852 ntBASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Gm2951-201ENSMUST00000169447 490 ntBASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Gm8893-201ENSMUST00000172146 1242 ntBASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Gm24369-201ENSMUST00000175387 96 ntBASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Gm26736-201ENSMUST00000180425 1236 ntBASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Gm7481-201ENSMUST00000182020 995 ntBASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Mir6919-201ENSMUST00000185146 62 ntBASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Gm28100-201ENSMUST00000186560 582 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Gm8925-201ENSMUST00000197212 763 ntBASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Gm43479-201ENSMUST00000200801 529 ntTSL 2 BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Gm18765-201ENSMUST00000203166 660 ntBASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Gm5307-201ENSMUST00000204772 760 ntBASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 AC163623.2-202ENSMUST00000214165 610 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 AL591207.2-201ENSMUST00000222991 337 ntBASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Gm16391-201ENSMUST00000086601 447 ntBASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Gm38276-201ENSMUST00000192446 1343 ntBASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Gm38156-201ENSMUST00000194601 2260 ntBASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms