Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Nphp4P59240 Gm43849-201ENSMUST00000201086 215 ntBASIC9.87□□□□□ -0.83
Nphp4P59240 Gm44227-201ENSMUST00000203576 241 ntBASIC9.87□□□□□ -0.83
Nphp4P59240 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC9.87□□□□□ -0.83
Nphp4P59240 Gm19047-201ENSMUST00000220922 1099 ntBASIC9.87□□□□□ -0.83
Nphp4P59240 AC133598.3-204ENSMUST00000224260 767 ntBASIC9.87□□□□□ -0.83
Nphp4P59240 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nphp4P59240 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nphp4P59240 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nphp4P59240 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nphp4P59240 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nphp4P59240 Pogk-203ENSMUST00000131487 8692 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nphp4P59240 Gm42972-201ENSMUST00000196937 5617 ntBASIC9.87□□□□□ -0.83
Nphp4P59240 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nphp4P59240 Gm16025-202ENSMUST00000161923 2425 ntTSL 2 BASIC9.86□□□□□ -0.83
Nphp4P59240 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nphp4P59240 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nphp4P59240 Gm43254-201ENSMUST00000199187 2491 ntBASIC9.86□□□□□ -0.83
Nphp4P59240 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nphp4P59240 Gm43533-201ENSMUST00000202933 2936 ntBASIC9.86□□□□□ -0.83
Nphp4P59240 Sema3e-201ENSMUST00000073957 6861 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nphp4P59240 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Nphp4P59240 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nphp4P59240 Snrnp200-201ENSMUST00000103220 6745 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nphp4P59240 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Nphp4P59240 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Nphp4P59240 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC9.86□□□□□ -0.83
Nphp4P59240 Gm14531-201ENSMUST00000120845 285 ntBASIC9.86□□□□□ -0.83
Nphp4P59240 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC9.86□□□□□ -0.83
Nphp4P59240 Gm24682-201ENSMUST00000158764 137 ntBASIC9.86□□□□□ -0.83
Nphp4P59240 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nphp4P59240 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nphp4P59240 AC151967.1-201ENSMUST00000198146 76 ntBASIC9.86□□□□□ -0.83
Nphp4P59240 Gm19238-201ENSMUST00000221936 1260 ntBASIC9.86□□□□□ -0.83
Nphp4P59240 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC9.86□□□□□ -0.83
Nphp4P59240 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nphp4P59240 Gpr87-201ENSMUST00000056898 1080 ntBASIC9.86□□□□□ -0.83
Nphp4P59240 Gm16020-201ENSMUST00000084281 210 ntBASIC9.86□□□□□ -0.83
Nphp4P59240 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Nphp4P59240 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
Nphp4P59240 Otud7b-203ENSMUST00000098849 8046 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Nphp4P59240 2410089E03Rik-201ENSMUST00000110617 10469 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Nphp4P59240 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nphp4P59240 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Nphp4P59240 Gm15575-201ENSMUST00000119414 1581 ntBASIC9.86□□□□□ -0.83
Nphp4P59240 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nphp4P59240 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nphp4P59240 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nphp4P59240 Gm43422-201ENSMUST00000199780 3571 ntBASIC9.86□□□□□ -0.83
Nphp4P59240 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nphp4P59240 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Nphp4P59240 AC155298.3-201ENSMUST00000225307 3220 ntBASIC9.86□□□□□ -0.83
Nphp4P59240 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Nphp4P59240 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Nphp4P59240 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nphp4P59240 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nphp4P59240 Ing5-201ENSMUST00000027505 4533 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nphp4P59240 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nphp4P59240 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Nphp4P59240 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC9.85□□□□□ -0.83
Nphp4P59240 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Nphp4P59240 AC107763.1-202ENSMUST00000225021 2663 ntBASIC9.85□□□□□ -0.83
Nphp4P59240 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC9.85□□□□□ -0.83
Nphp4P59240 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC9.85□□□□□ -0.83
Nphp4P59240 Gm7289-201ENSMUST00000168993 734 ntBASIC9.85□□□□□ -0.83
Nphp4P59240 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nphp4P59240 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nphp4P59240 Gm27018-201ENSMUST00000181136 225 ntBASIC9.85□□□□□ -0.83
Nphp4P59240 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC9.85□□□□□ -0.83
Nphp4P59240 Gm43555-201ENSMUST00000196588 310 ntBASIC9.85□□□□□ -0.83
Nphp4P59240 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC9.85□□□□□ -0.83
Nphp4P59240 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC9.85□□□□□ -0.83
Nphp4P59240 Gm44279-201ENSMUST00000205154 472 ntBASIC9.85□□□□□ -0.83
Nphp4P59240 Gm44508-201ENSMUST00000206943 1157 ntBASIC9.85□□□□□ -0.83
Nphp4P59240 Gm9357-201ENSMUST00000207138 805 ntBASIC9.85□□□□□ -0.83
Nphp4P59240 Gm45279-201ENSMUST00000210315 391 ntBASIC9.85□□□□□ -0.83
Nphp4P59240 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC9.85□□□□□ -0.83
Nphp4P59240 Gm9267-201ENSMUST00000222831 404 ntBASIC9.85□□□□□ -0.83
Nphp4P59240 Gm43970-201ENSMUST00000204346 3605 ntBASIC9.85□□□□□ -0.83
Nphp4P59240 Zfp229-201ENSMUST00000065871 4525 ntAPPRIS P1 TSL 3 BASIC9.85□□□□□ -0.83
Nphp4P59240 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nphp4P59240 Thada-201ENSMUST00000047524 7884 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nphp4P59240 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nphp4P59240 Nemp1-201ENSMUST00000048099 6002 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nphp4P59240 Gm42820-201ENSMUST00000200084 3063 ntBASIC9.85□□□□□ -0.83
Nphp4P59240 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC9.85□□□□□ -0.83
Nphp4P59240 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC9.85□□□□□ -0.83
Nphp4P59240 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Nphp4P59240 Ahcyl2-203ENSMUST00000115238 5129 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nphp4P59240 Ick-202ENSMUST00000044551 6560 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nphp4P59240 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nphp4P59240 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
Nphp4P59240 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nphp4P59240 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nphp4P59240 Gm22231-201ENSMUST00000101027 73 ntBASIC9.84□□□□□ -0.83
Nphp4P59240 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC9.84□□□□□ -0.83
Nphp4P59240 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
Nphp4P59240 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nphp4P59240 Gm24545-201ENSMUST00000158651 85 ntBASIC9.84□□□□□ -0.83
Nphp4P59240 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms