Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Sox3P53784 AC105407.2-205ENSMUST00000224680 2733 ntBASIC7.12□□□□□ -1.27
Sox3P53784 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox3P53784 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sox3P53784 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sox3P53784 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sox3P53784 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox3P53784 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox3P53784 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sox3P53784 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Sox3P53784 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox3P53784 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox3P53784 Lrrc3b-203ENSMUST00000223700 1426 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Sox3P53784 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sox3P53784 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox3P53784 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sox3P53784 Gm44834-201ENSMUST00000206671 1396 ntBASIC7.11□□□□□ -1.27
Sox3P53784 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Sox3P53784 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox3P53784 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox3P53784 Gm4927-201ENSMUST00000219548 1318 ntBASIC7.11□□□□□ -1.27
Sox3P53784 Kctd16-201ENSMUST00000091927 1349 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox3P53784 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Sox3P53784 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox3P53784 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sox3P53784 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox3P53784 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox3P53784 Gm26144-201ENSMUST00000104475 132 ntBASIC7.11□□□□□ -1.27
Sox3P53784 Gm13521-201ENSMUST00000118922 866 ntBASIC7.11□□□□□ -1.27
Sox3P53784 Gm15574-201ENSMUST00000119937 405 ntBASIC7.11□□□□□ -1.27
Sox3P53784 Gm12773-201ENSMUST00000120134 587 ntBASIC7.11□□□□□ -1.27
Sox3P53784 Gm12804-201ENSMUST00000121030 999 ntBASIC7.11□□□□□ -1.27
Sox3P53784 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC7.11□□□□□ -1.27
Sox3P53784 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC7.11□□□□□ -1.27
Sox3P53784 Gm12265-201ENSMUST00000139025 468 ntTSL 2 BASIC7.11□□□□□ -1.27
Sox3P53784 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC7.11□□□□□ -1.27
Sox3P53784 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sox3P53784 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC7.11□□□□□ -1.27
Sox3P53784 Mir7082-201ENSMUST00000183526 92 ntBASIC7.11□□□□□ -1.27
Sox3P53784 Gm28428-201ENSMUST00000188886 697 ntBASIC7.11□□□□□ -1.27
Sox3P53784 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sox3P53784 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC7.11□□□□□ -1.27
Sox3P53784 Gm37526-201ENSMUST00000194640 619 ntBASIC7.11□□□□□ -1.27
Sox3P53784 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC7.11□□□□□ -1.27
Sox3P53784 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC7.11□□□□□ -1.27
Sox3P53784 Gm2926-201ENSMUST00000205625 239 ntBASIC7.11□□□□□ -1.27
Sox3P53784 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC7.11□□□□□ -1.27
Sox3P53784 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC7.11□□□□□ -1.27
Sox3P53784 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC7.11□□□□□ -1.27
Sox3P53784 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox3P53784 Olfr433-202ENSMUST00000214690 2968 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Sox3P53784 AC125087.1-201ENSMUST00000227552 514 ntBASIC7.11□□□□□ -1.27
Sox3P53784 AC133203.1-201ENSMUST00000228241 301 ntBASIC7.11□□□□□ -1.27
Sox3P53784 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox3P53784 Olfr380-201ENSMUST00000075532 936 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Sox3P53784 Gm24613-201ENSMUST00000083266 130 ntBASIC7.11□□□□□ -1.27
Sox3P53784 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox3P53784 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox3P53784 Gm44752-201ENSMUST00000207140 3305 ntBASIC7.11□□□□□ -1.27
Sox3P53784 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox3P53784 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox3P53784 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox3P53784 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Sox3P53784 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox3P53784 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox3P53784 Cd247-208ENSMUST00000178336 2807 ntTSL 5 BASIC7.11□□□□□ -1.27
Sox3P53784 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox3P53784 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox3P53784 Npr3-204ENSMUST00000228489 1969 ntBASIC7.11□□□□□ -1.27
Sox3P53784 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sox3P53784 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC7.11□□□□□ -1.27
Sox3P53784 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC7.1□□□□□ -1.27
Sox3P53784 Gm45807-201ENSMUST00000209142 2874 ntBASIC7.1□□□□□ -1.27
Sox3P53784 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sox3P53784 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sox3P53784 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sox3P53784 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sox3P53784 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sox3P53784 2010110K18Rik-201ENSMUST00000181453 2400 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sox3P53784 Gm46430-207ENSMUST00000222254 1703 ntTSL 5 BASIC7.1□□□□□ -1.27
Sox3P53784 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sox3P53784 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC7.1□□□□□ -1.27
Sox3P53784 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sox3P53784 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sox3P53784 AC107452.3-201ENSMUST00000228807 1308 ntBASIC7.1□□□□□ -1.27
Sox3P53784 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sox3P53784 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sox3P53784 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sox3P53784 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sox3P53784 Gm45354-201ENSMUST00000199820 2557 ntBASIC7.1□□□□□ -1.27
Sox3P53784 Gm22426-201ENSMUST00000103811 96 ntBASIC7.1□□□□□ -1.27
Sox3P53784 Gm23701-201ENSMUST00000103893 110 ntBASIC7.1□□□□□ -1.27
Sox3P53784 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Sox3P53784 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sox3P53784 Gm8916-201ENSMUST00000119732 949 ntBASIC7.1□□□□□ -1.27
Sox3P53784 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC7.1□□□□□ -1.27
Sox3P53784 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sox3P53784 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC7.1□□□□□ -1.27
Sox3P53784 Gm24781-201ENSMUST00000157636 117 ntBASIC7.1□□□□□ -1.27
Sox3P53784 Mir6340-201ENSMUST00000183857 119 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms