Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC7.47□□□□□ -1.21
HttP42859 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 Gm37100-201ENSMUST00000193344 1353 ntBASIC7.47□□□□□ -1.21
HttP42859 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 Mir1960-201ENSMUST00000157488 78 ntBASIC7.47□□□□□ -1.21
HttP42859 Gm9597-201ENSMUST00000171913 602 ntBASIC7.47□□□□□ -1.21
HttP42859 Gm20778-201ENSMUST00000178524 627 ntBASIC7.47□□□□□ -1.21
HttP42859 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC7.47□□□□□ -1.21
HttP42859 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 Amy2b-201ENSMUST00000120184 1577 ntBASIC7.47□□□□□ -1.21
HttP42859 Klf10-202ENSMUST00000226363 2917 ntBASIC7.47□□□□□ -1.21
HttP42859 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 AC122426.1-201ENSMUST00000214736 2235 ntBASIC7.47□□□□□ -1.21
HttP42859 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
HttP42859 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 Gm14601-201ENSMUST00000120892 236 ntBASIC7.47□□□□□ -1.21
HttP42859 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC7.47□□□□□ -1.21
HttP42859 AC153800.1-201ENSMUST00000219212 365 ntBASIC7.47□□□□□ -1.21
HttP42859 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC7.47□□□□□ -1.21
HttP42859 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 Pcdhb11-201ENSMUST00000053073 4419 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
HttP42859 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
HttP42859 Atp10d-202ENSMUST00000126664 6052 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
HttP42859 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
HttP42859 Gm11343-201ENSMUST00000120579 599 ntBASIC7.46□□□□□ -1.21
HttP42859 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC7.46□□□□□ -1.21
HttP42859 Gm2959-201ENSMUST00000169844 621 ntBASIC7.46□□□□□ -1.21
HttP42859 Gm25675-201ENSMUST00000174979 118 ntBASIC7.46□□□□□ -1.21
HttP42859 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
HttP42859 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC7.46□□□□□ -1.21
HttP42859 AC162934.2-201ENSMUST00000221451 249 ntBASIC7.46□□□□□ -1.21
HttP42859 AC192333.6-201ENSMUST00000224565 725 ntBASIC7.46□□□□□ -1.21
HttP42859 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
HttP42859 Olfr1360-202ENSMUST00000205788 1988 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
HttP42859 Sec16b-201ENSMUST00000027881 4414 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
HttP42859 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
HttP42859 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
HttP42859 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HttP42859 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
HttP42859 AC168056.4-201ENSMUST00000223835 2567 ntBASIC7.46□□□□□ -1.22
HttP42859 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HttP42859 Gm28403-201ENSMUST00000188743 2710 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
HttP42859 Gm42685-201ENSMUST00000200378 2390 ntBASIC7.46□□□□□ -1.22
HttP42859 Gm43915-201ENSMUST00000203013 5037 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
HttP42859 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HttP42859 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
HttP42859 Gm23440-201ENSMUST00000104299 130 ntBASIC7.46□□□□□ -1.22
HttP42859 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC7.46□□□□□ -1.22
HttP42859 Gm35323-201ENSMUST00000191836 499 ntBASIC7.46□□□□□ -1.22
HttP42859 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
HttP42859 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC7.46□□□□□ -1.22
HttP42859 AC139197.1-201ENSMUST00000228332 813 ntBASIC7.46□□□□□ -1.22
HttP42859 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HttP42859 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HttP42859 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HttP42859 Slc34a1-205ENSMUST00000225259 3983 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
HttP42859 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HttP42859 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC7.46□□□□□ -1.22
HttP42859 6030443J06Rik-203ENSMUST00000181764 4299 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
HttP42859 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HttP42859 Gm26541-201ENSMUST00000181866 3973 ntTSL 5 BASIC7.46□□□□□ -1.22
HttP42859 Ncapg2-201ENSMUST00000084828 4684 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
HttP42859 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC7.45□□□□□ -1.22
HttP42859 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HttP42859 Gm37735-201ENSMUST00000193995 1406 ntBASIC7.45□□□□□ -1.22
HttP42859 Acox3-202ENSMUST00000068947 3976 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
HttP42859 Gm13641-201ENSMUST00000117993 473 ntBASIC7.45□□□□□ -1.22
HttP42859 Gm10913-201ENSMUST00000133732 463 ntBASIC7.45□□□□□ -1.22
HttP42859 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC7.45□□□□□ -1.22
HttP42859 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC7.45□□□□□ -1.22
HttP42859 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HttP42859 Gm25603-201ENSMUST00000158361 105 ntBASIC7.45□□□□□ -1.22
HttP42859 Gm4617-201ENSMUST00000178993 331 ntBASIC7.45□□□□□ -1.22
HttP42859 Mir6403-201ENSMUST00000185007 129 ntBASIC7.45□□□□□ -1.22
HttP42859 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC7.45□□□□□ -1.22
HttP42859 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HttP42859 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC7.45□□□□□ -1.22
HttP42859 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC7.45□□□□□ -1.22
HttP42859 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HttP42859 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HttP42859 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
HttP42859 Gm15127-202ENSMUST00000101190 1972 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
HttP42859 Plppr1-201ENSMUST00000076670 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HttP42859 Abce1-201ENSMUST00000080536 3793 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HttP42859 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
HttP42859 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
HttP42859 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC7.45□□□□□ -1.22
HttP42859 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms