Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 AC125074.1-201ENSMUST00000227970 1331 ntBASIC6.01□□□□□ -1.45
Cdx1P18111 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Cdx1P18111 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cdx1P18111 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdx1P18111 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Cdx1P18111 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cdx1P18111 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Cdx1P18111 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdx1P18111 Gm10773-201ENSMUST00000218071 3935 ntBASIC6.01□□□□□ -1.45
Cdx1P18111 Gm17027-201ENSMUST00000171202 1403 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Cdx1P18111 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdx1P18111 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdx1P18111 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC6.01□□□□□ -1.45
Cdx1P18111 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdx1P18111 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cdx1P18111 Gm42676-201ENSMUST00000197609 2686 ntBASIC6.01□□□□□ -1.45
Cdx1P18111 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cdx1P18111 Gm16701-201ENSMUST00000181309 1627 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cdx1P18111 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdx1P18111 n-R5s1-201ENSMUST00000101925 119 ntBASIC6.01□□□□□ -1.45
Cdx1P18111 Gm23529-201ENSMUST00000104562 132 ntBASIC6.01□□□□□ -1.45
Cdx1P18111 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC6.01□□□□□ -1.45
Cdx1P18111 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cdx1P18111 Gm13466-201ENSMUST00000121515 999 ntBASIC6.01□□□□□ -1.45
Cdx1P18111 Gm25845-201ENSMUST00000122588 310 ntBASIC6.01□□□□□ -1.45
Cdx1P18111 A630023P12Rik-201ENSMUST00000129007 1221 ntTSL 2 BASIC6.01□□□□□ -1.45
Cdx1P18111 Gm25277-201ENSMUST00000157266 324 ntBASIC6.01□□□□□ -1.45
Cdx1P18111 Gm25837-201ENSMUST00000158919 108 ntBASIC6.01□□□□□ -1.45
Cdx1P18111 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Cdx1P18111 Gm17122-201ENSMUST00000166047 372 ntTSL 5 BASIC6.01□□□□□ -1.45
Cdx1P18111 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC6.01□□□□□ -1.45
Cdx1P18111 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC6.01□□□□□ -1.45
Cdx1P18111 1700036G14Rik-201ENSMUST00000189046 542 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cdx1P18111 Gm29462-201ENSMUST00000191458 288 ntBASIC6.01□□□□□ -1.45
Cdx1P18111 Gm18988-201ENSMUST00000205601 746 ntBASIC6.01□□□□□ -1.45
Cdx1P18111 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC6.01□□□□□ -1.45
Cdx1P18111 Gm3774-201ENSMUST00000209773 435 ntBASIC6.01□□□□□ -1.45
Cdx1P18111 Gm45549-201ENSMUST00000210180 975 ntBASIC6.01□□□□□ -1.45
Cdx1P18111 Gm45343-201ENSMUST00000210452 828 ntBASIC6.01□□□□□ -1.45
Cdx1P18111 Gm32842-201ENSMUST00000212653 738 ntBASIC6.01□□□□□ -1.45
Cdx1P18111 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC6.01□□□□□ -1.45
Cdx1P18111 Gm18619-201ENSMUST00000222722 1147 ntBASIC6.01□□□□□ -1.45
Cdx1P18111 Gm34611-201ENSMUST00000223252 627 ntTSL 5 BASIC6.01□□□□□ -1.45
Cdx1P18111 AC154843.1-201ENSMUST00000226897 1138 ntBASIC6.01□□□□□ -1.45
Cdx1P18111 AC110236.1-201ENSMUST00000227807 527 ntBASIC6.01□□□□□ -1.45
Cdx1P18111 Lyzl1-201ENSMUST00000025076 846 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdx1P18111 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdx1P18111 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
Cdx1P18111 Olfr328-201ENSMUST00000073933 933 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Cdx1P18111 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Cdx1P18111 Gm10283-201ENSMUST00000093494 354 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdx1P18111 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Cdx1P18111 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Cdx1P18111 Trim12a-202ENSMUST00000106837 1389 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Cdx1P18111 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cdx1P18111 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdx1P18111 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.01□□□□□ -1.45
Cdx1P18111 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC6.01□□□□□ -1.45
Cdx1P18111 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Cdx1P18111 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
Cdx1P18111 Gm44141-201ENSMUST00000204231 1583 ntBASIC6.01□□□□□ -1.45
Cdx1P18111 Gm45520-201ENSMUST00000210109 2031 ntBASIC6.01□□□□□ -1.45
Cdx1P18111 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Cdx1P18111 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdx1P18111 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
Cdx1P18111 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cdx1P18111 Gm37183-201ENSMUST00000191712 3405 ntBASIC6□□□□□ -1.45
Cdx1P18111 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cdx1P18111 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Cdx1P18111 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
Cdx1P18111 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cdx1P18111 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6□□□□□ -1.45
Cdx1P18111 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Cdx1P18111 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cdx1P18111 Cnpy1-203ENSMUST00000120068 2284 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cdx1P18111 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Cdx1P18111 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Cdx1P18111 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Cdx1P18111 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cdx1P18111 D3Ertd751e-208ENSMUST00000192193 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Cdx1P18111 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cdx1P18111 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6□□□□□ -1.45
Cdx1P18111 Gm13573-201ENSMUST00000116410 631 ntBASIC6□□□□□ -1.45
Cdx1P18111 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cdx1P18111 Crem-218ENSMUST00000139537 807 ntTSL 2 BASIC6□□□□□ -1.45
Cdx1P18111 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC6□□□□□ -1.45
Cdx1P18111 Gm8550-201ENSMUST00000161621 653 ntBASIC6□□□□□ -1.45
Cdx1P18111 Gm43518-201ENSMUST00000166129 650 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
Cdx1P18111 Gm20511-201ENSMUST00000174079 456 ntTSL 3 BASIC6□□□□□ -1.45
Cdx1P18111 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Cdx1P18111 Trav5d-4-201ENSMUST00000179701 343 ntAPPRIS P1 BASIC6□□□□□ -1.45
Cdx1P18111 Trav5n-4-201ENSMUST00000179997 343 ntAPPRIS P1 BASIC6□□□□□ -1.45
Cdx1P18111 Gm18301-201ENSMUST00000185261 888 ntBASIC6□□□□□ -1.45
Cdx1P18111 Gm18349-201ENSMUST00000187440 904 ntBASIC6□□□□□ -1.45
Cdx1P18111 Gm22149-202ENSMUST00000196259 137 ntBASIC6□□□□□ -1.45
Cdx1P18111 Gm26413-202ENSMUST00000198972 127 ntBASIC6□□□□□ -1.45
Cdx1P18111 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC6□□□□□ -1.45
Cdx1P18111 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC6□□□□□ -1.45
Cdx1P18111 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC6□□□□□ -1.45
Cdx1P18111 Gm4780-201ENSMUST00000213206 1242 ntBASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms