Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Speer3W4VSP1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Speer3W4VSP1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Speer3W4VSP1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Speer3W4VSP1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Speer3W4VSP1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Speer3W4VSP1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Speer3W4VSP1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Speer3W4VSP1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.74■□□□□ 0.59
Speer3W4VSP1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.74■□□□□ 0.59
Speer3W4VSP1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.74■□□□□ 0.59
Speer3W4VSP1 Serp2-204ENSMUST00000228055 705 ntBASIC18.74■□□□□ 0.59
Speer3W4VSP1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Speer3W4VSP1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Speer3W4VSP1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Speer3W4VSP1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Speer3W4VSP1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Speer3W4VSP1 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.74■□□□□ 0.59
Speer3W4VSP1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Speer3W4VSP1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Speer3W4VSP1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Speer3W4VSP1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Speer3W4VSP1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Speer3W4VSP1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Speer3W4VSP1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.73■□□□□ 0.59
Speer3W4VSP1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Speer3W4VSP1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Speer3W4VSP1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Speer3W4VSP1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Speer3W4VSP1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Speer3W4VSP1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.73■□□□□ 0.59
Speer3W4VSP1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Speer3W4VSP1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Speer3W4VSP1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Speer3W4VSP1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Speer3W4VSP1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Speer3W4VSP1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.72■□□□□ 0.59
Speer3W4VSP1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Speer3W4VSP1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Speer3W4VSP1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Speer3W4VSP1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Speer3W4VSP1 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.72■□□□□ 0.59
Speer3W4VSP1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Speer3W4VSP1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Speer3W4VSP1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Speer3W4VSP1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
Speer3W4VSP1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Speer3W4VSP1 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.71■□□□□ 0.59
Speer3W4VSP1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Speer3W4VSP1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.71■□□□□ 0.59
Speer3W4VSP1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
Speer3W4VSP1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Speer3W4VSP1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Speer3W4VSP1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Speer3W4VSP1 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.7■□□□□ 0.58
Speer3W4VSP1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Speer3W4VSP1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Speer3W4VSP1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Speer3W4VSP1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Speer3W4VSP1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.7■□□□□ 0.58
Speer3W4VSP1 Gm40848-201ENSMUST00000221998 324 ntBASIC18.7■□□□□ 0.58
Speer3W4VSP1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Speer3W4VSP1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Speer3W4VSP1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Speer3W4VSP1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Speer3W4VSP1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Speer3W4VSP1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Speer3W4VSP1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Speer3W4VSP1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Speer3W4VSP1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Speer3W4VSP1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Speer3W4VSP1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Speer3W4VSP1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Speer3W4VSP1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Speer3W4VSP1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Speer3W4VSP1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Speer3W4VSP1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Speer3W4VSP1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Speer3W4VSP1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Speer3W4VSP1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Speer3W4VSP1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Speer3W4VSP1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Speer3W4VSP1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Speer3W4VSP1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Speer3W4VSP1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Speer3W4VSP1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Speer3W4VSP1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Speer3W4VSP1 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.68■□□□□ 0.58
Speer3W4VSP1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Speer3W4VSP1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Speer3W4VSP1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Speer3W4VSP1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Speer3W4VSP1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.67■□□□□ 0.58
Speer3W4VSP1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Speer3W4VSP1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Speer3W4VSP1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Speer3W4VSP1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Speer3W4VSP1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Speer3W4VSP1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Speer3W4VSP1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms