Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdfS4R2K0 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdfS4R2K0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdfS4R2K0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdfS4R2K0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdfS4R2K0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PdfS4R2K0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdfS4R2K0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.12□□□□□ -0.15
PdfS4R2K0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PdfS4R2K0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdfS4R2K0 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.12□□□□□ -0.15
PdfS4R2K0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PdfS4R2K0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PdfS4R2K0 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdfS4R2K0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdfS4R2K0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdfS4R2K0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdfS4R2K0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC14.12□□□□□ -0.15
PdfS4R2K0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
PdfS4R2K0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PdfS4R2K0 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PdfS4R2K0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PdfS4R2K0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC14.12□□□□□ -0.15
PdfS4R2K0 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.12□□□□□ -0.15
PdfS4R2K0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdfS4R2K0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PdfS4R2K0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdfS4R2K0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdfS4R2K0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
PdfS4R2K0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
PdfS4R2K0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdfS4R2K0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PdfS4R2K0 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.12□□□□□ -0.15
PdfS4R2K0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdfS4R2K0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdfS4R2K0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PdfS4R2K0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.12□□□□□ -0.15
PdfS4R2K0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PdfS4R2K0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PdfS4R2K0 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PdfS4R2K0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PdfS4R2K0 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.11□□□□□ -0.15
PdfS4R2K0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PdfS4R2K0 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PdfS4R2K0 AA386476-201ENSMUST00000098781 1665 ntBASIC14.11□□□□□ -0.15
PdfS4R2K0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PdfS4R2K0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PdfS4R2K0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PdfS4R2K0 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.11□□□□□ -0.15
PdfS4R2K0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
PdfS4R2K0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PdfS4R2K0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
PdfS4R2K0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PdfS4R2K0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PdfS4R2K0 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PdfS4R2K0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdfS4R2K0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdfS4R2K0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdfS4R2K0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
PdfS4R2K0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdfS4R2K0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdfS4R2K0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdfS4R2K0 Gm43530-201ENSMUST00000195920 274 ntBASIC14.1□□□□□ -0.15
PdfS4R2K0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdfS4R2K0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdfS4R2K0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PdfS4R2K0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdfS4R2K0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdfS4R2K0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PdfS4R2K0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PdfS4R2K0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PdfS4R2K0 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdfS4R2K0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdfS4R2K0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PdfS4R2K0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdfS4R2K0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PdfS4R2K0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PdfS4R2K0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdfS4R2K0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PdfS4R2K0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PdfS4R2K0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdfS4R2K0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdfS4R2K0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC14.09□□□□□ -0.15
PdfS4R2K0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.09□□□□□ -0.15
PdfS4R2K0 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.09□□□□□ -0.15
PdfS4R2K0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PdfS4R2K0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdfS4R2K0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdfS4R2K0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdfS4R2K0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdfS4R2K0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdfS4R2K0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PdfS4R2K0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PdfS4R2K0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PdfS4R2K0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.08□□□□□ -0.15
PdfS4R2K0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
PdfS4R2K0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdfS4R2K0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdfS4R2K0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdfS4R2K0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms