Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn6Q9Z262 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn6Q9Z262 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.31■□□□□ 0.36
Cldn6Q9Z262 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.31■□□□□ 0.36
Cldn6Q9Z262 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.3■□□□□ 0.36
Cldn6Q9Z262 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn6Q9Z262 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Cldn6Q9Z262 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn6Q9Z262 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cldn6Q9Z262 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.3■□□□□ 0.36
Cldn6Q9Z262 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn6Q9Z262 Gm6420-201ENSMUST00000193885 723 ntBASIC17.3■□□□□ 0.36
Cldn6Q9Z262 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn6Q9Z262 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn6Q9Z262 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn6Q9Z262 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.3■□□□□ 0.36
Cldn6Q9Z262 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn6Q9Z262 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn6Q9Z262 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn6Q9Z262 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn6Q9Z262 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn6Q9Z262 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn6Q9Z262 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn6Q9Z262 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn6Q9Z262 Nespas-201ENSMUST00000143738 1083 ntBASIC17.29■□□□□ 0.36
Cldn6Q9Z262 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.29■□□□□ 0.36
Cldn6Q9Z262 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn6Q9Z262 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cldn6Q9Z262 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn6Q9Z262 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn6Q9Z262 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn6Q9Z262 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Cldn6Q9Z262 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn6Q9Z262 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn6Q9Z262 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.29■□□□□ 0.36
Cldn6Q9Z262 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cldn6Q9Z262 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn6Q9Z262 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn6Q9Z262 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn6Q9Z262 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn6Q9Z262 AV356131-201ENSMUST00000206201 750 ntBASIC17.28■□□□□ 0.36
Cldn6Q9Z262 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn6Q9Z262 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn6Q9Z262 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cldn6Q9Z262 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn6Q9Z262 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn6Q9Z262 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn6Q9Z262 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.27■□□□□ 0.36
Cldn6Q9Z262 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn6Q9Z262 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.27■□□□□ 0.36
Cldn6Q9Z262 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn6Q9Z262 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn6Q9Z262 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn6Q9Z262 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cldn6Q9Z262 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn6Q9Z262 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cldn6Q9Z262 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cldn6Q9Z262 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn6Q9Z262 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Cldn6Q9Z262 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.26■□□□□ 0.35
Cldn6Q9Z262 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn6Q9Z262 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cldn6Q9Z262 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn6Q9Z262 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn6Q9Z262 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn6Q9Z262 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Cldn6Q9Z262 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn6Q9Z262 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn6Q9Z262 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn6Q9Z262 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn6Q9Z262 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.25■□□□□ 0.35
Cldn6Q9Z262 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn6Q9Z262 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cldn6Q9Z262 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.25■□□□□ 0.35
Cldn6Q9Z262 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.25■□□□□ 0.35
Cldn6Q9Z262 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn6Q9Z262 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.25■□□□□ 0.35
Cldn6Q9Z262 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn6Q9Z262 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn6Q9Z262 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn6Q9Z262 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn6Q9Z262 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cldn6Q9Z262 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn6Q9Z262 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn6Q9Z262 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn6Q9Z262 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn6Q9Z262 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn6Q9Z262 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn6Q9Z262 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn6Q9Z262 Gm26571-201ENSMUST00000181399 666 ntBASIC17.24■□□□□ 0.35
Cldn6Q9Z262 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.24■□□□□ 0.35
Cldn6Q9Z262 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.24■□□□□ 0.35
Cldn6Q9Z262 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn6Q9Z262 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn6Q9Z262 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn6Q9Z262 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn6Q9Z262 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn6Q9Z262 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn6Q9Z262 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn6Q9Z262 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms