Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nr1h3Q9Z0Y9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Nr1h3Q9Z0Y9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nr1h3Q9Z0Y9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nr1h3Q9Z0Y9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Nr1h3Q9Z0Y9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nr1h3Q9Z0Y9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nr1h3Q9Z0Y9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nr1h3Q9Z0Y9 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.99■□□□□ 0.79
Nr1h3Q9Z0Y9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Nr1h3Q9Z0Y9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nr1h3Q9Z0Y9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nr1h3Q9Z0Y9 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.99■□□□□ 0.79
Nr1h3Q9Z0Y9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nr1h3Q9Z0Y9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nr1h3Q9Z0Y9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nr1h3Q9Z0Y9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nr1h3Q9Z0Y9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Nr1h3Q9Z0Y9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nr1h3Q9Z0Y9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nr1h3Q9Z0Y9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nr1h3Q9Z0Y9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nr1h3Q9Z0Y9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nr1h3Q9Z0Y9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nr1h3Q9Z0Y9 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.98■□□□□ 0.79
Nr1h3Q9Z0Y9 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.98■□□□□ 0.79
Nr1h3Q9Z0Y9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
Nr1h3Q9Z0Y9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.98■□□□□ 0.79
Nr1h3Q9Z0Y9 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.98■□□□□ 0.79
Nr1h3Q9Z0Y9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nr1h3Q9Z0Y9 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.98■□□□□ 0.79
Nr1h3Q9Z0Y9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nr1h3Q9Z0Y9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nr1h3Q9Z0Y9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Nr1h3Q9Z0Y9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nr1h3Q9Z0Y9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nr1h3Q9Z0Y9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nr1h3Q9Z0Y9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Nr1h3Q9Z0Y9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nr1h3Q9Z0Y9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nr1h3Q9Z0Y9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nr1h3Q9Z0Y9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nr1h3Q9Z0Y9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nr1h3Q9Z0Y9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Nr1h3Q9Z0Y9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nr1h3Q9Z0Y9 Gm2399-201ENSMUST00000104944 225 ntBASIC19.97■□□□□ 0.79
Nr1h3Q9Z0Y9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nr1h3Q9Z0Y9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nr1h3Q9Z0Y9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.97■□□□□ 0.79
Nr1h3Q9Z0Y9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.97■□□□□ 0.79
Nr1h3Q9Z0Y9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nr1h3Q9Z0Y9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nr1h3Q9Z0Y9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nr1h3Q9Z0Y9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nr1h3Q9Z0Y9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nr1h3Q9Z0Y9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Nr1h3Q9Z0Y9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nr1h3Q9Z0Y9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Nr1h3Q9Z0Y9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nr1h3Q9Z0Y9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nr1h3Q9Z0Y9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nr1h3Q9Z0Y9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nr1h3Q9Z0Y9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.96■□□□□ 0.79
Nr1h3Q9Z0Y9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nr1h3Q9Z0Y9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nr1h3Q9Z0Y9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Nr1h3Q9Z0Y9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nr1h3Q9Z0Y9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nr1h3Q9Z0Y9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nr1h3Q9Z0Y9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nr1h3Q9Z0Y9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Nr1h3Q9Z0Y9 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.95■□□□□ 0.78
Nr1h3Q9Z0Y9 Gm15378-201ENSMUST00000121894 207 ntBASIC19.95■□□□□ 0.78
Nr1h3Q9Z0Y9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nr1h3Q9Z0Y9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nr1h3Q9Z0Y9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nr1h3Q9Z0Y9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nr1h3Q9Z0Y9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.95■□□□□ 0.78
Nr1h3Q9Z0Y9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nr1h3Q9Z0Y9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nr1h3Q9Z0Y9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Nr1h3Q9Z0Y9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nr1h3Q9Z0Y9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nr1h3Q9Z0Y9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.94■□□□□ 0.78
Nr1h3Q9Z0Y9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Nr1h3Q9Z0Y9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nr1h3Q9Z0Y9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.94■□□□□ 0.78
Nr1h3Q9Z0Y9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nr1h3Q9Z0Y9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Nr1h3Q9Z0Y9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nr1h3Q9Z0Y9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nr1h3Q9Z0Y9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nr1h3Q9Z0Y9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nr1h3Q9Z0Y9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nr1h3Q9Z0Y9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nr1h3Q9Z0Y9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nr1h3Q9Z0Y9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nr1h3Q9Z0Y9 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.93■□□□□ 0.78
Nr1h3Q9Z0Y9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nr1h3Q9Z0Y9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms