Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn3Q9Z0G9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn3Q9Z0G9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn3Q9Z0G9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.66■□□□□ 0.58
Cldn3Q9Z0G9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn3Q9Z0G9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn3Q9Z0G9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn3Q9Z0G9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn3Q9Z0G9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn3Q9Z0G9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Cldn3Q9Z0G9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn3Q9Z0G9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn3Q9Z0G9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn3Q9Z0G9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
Cldn3Q9Z0G9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Cldn3Q9Z0G9 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.66■□□□□ 0.58
Cldn3Q9Z0G9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.66■□□□□ 0.58
Cldn3Q9Z0G9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.66■□□□□ 0.58
Cldn3Q9Z0G9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn3Q9Z0G9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn3Q9Z0G9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn3Q9Z0G9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn3Q9Z0G9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn3Q9Z0G9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn3Q9Z0G9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn3Q9Z0G9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn3Q9Z0G9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn3Q9Z0G9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn3Q9Z0G9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Cldn3Q9Z0G9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn3Q9Z0G9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn3Q9Z0G9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn3Q9Z0G9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn3Q9Z0G9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Cldn3Q9Z0G9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn3Q9Z0G9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cldn3Q9Z0G9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cldn3Q9Z0G9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cldn3Q9Z0G9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Cldn3Q9Z0G9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Cldn3Q9Z0G9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn3Q9Z0G9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn3Q9Z0G9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.64■□□□□ 0.57
Cldn3Q9Z0G9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn3Q9Z0G9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.64■□□□□ 0.57
Cldn3Q9Z0G9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn3Q9Z0G9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Cldn3Q9Z0G9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn3Q9Z0G9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn3Q9Z0G9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn3Q9Z0G9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn3Q9Z0G9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn3Q9Z0G9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn3Q9Z0G9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn3Q9Z0G9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn3Q9Z0G9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn3Q9Z0G9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn3Q9Z0G9 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.63■□□□□ 0.57
Cldn3Q9Z0G9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.63■□□□□ 0.57
Cldn3Q9Z0G9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn3Q9Z0G9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.63■□□□□ 0.57
Cldn3Q9Z0G9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn3Q9Z0G9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Cldn3Q9Z0G9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.63■□□□□ 0.57
Cldn3Q9Z0G9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn3Q9Z0G9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn3Q9Z0G9 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.63■□□□□ 0.57
Cldn3Q9Z0G9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.63■□□□□ 0.57
Cldn3Q9Z0G9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn3Q9Z0G9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn3Q9Z0G9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn3Q9Z0G9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn3Q9Z0G9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn3Q9Z0G9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn3Q9Z0G9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn3Q9Z0G9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn3Q9Z0G9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn3Q9Z0G9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.62■□□□□ 0.57
Cldn3Q9Z0G9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.62■□□□□ 0.57
Cldn3Q9Z0G9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn3Q9Z0G9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn3Q9Z0G9 Gm6365-201ENSMUST00000054711 744 ntBASIC18.62■□□□□ 0.57
Cldn3Q9Z0G9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn3Q9Z0G9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn3Q9Z0G9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn3Q9Z0G9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Cldn3Q9Z0G9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn3Q9Z0G9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cldn3Q9Z0G9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.62■□□□□ 0.57
Cldn3Q9Z0G9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn3Q9Z0G9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn3Q9Z0G9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn3Q9Z0G9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn3Q9Z0G9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Cldn3Q9Z0G9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn3Q9Z0G9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn3Q9Z0G9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn3Q9Z0G9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Cldn3Q9Z0G9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.61■□□□□ 0.57
Cldn3Q9Z0G9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms