Protein–RNA interactions for Protein: Q9Z0E3

Aire, Autoimmune regulator, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AireQ9Z0E3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AireQ9Z0E3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AireQ9Z0E3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AireQ9Z0E3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AireQ9Z0E3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
AireQ9Z0E3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
AireQ9Z0E3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.48■□□□□ 0.23
AireQ9Z0E3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AireQ9Z0E3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AireQ9Z0E3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AireQ9Z0E3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AireQ9Z0E3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AireQ9Z0E3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AireQ9Z0E3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AireQ9Z0E3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
AireQ9Z0E3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.47■□□□□ 0.23
AireQ9Z0E3 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AireQ9Z0E3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AireQ9Z0E3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
AireQ9Z0E3 AV356131-201ENSMUST00000206201 750 ntBASIC16.47■□□□□ 0.23
AireQ9Z0E3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
AireQ9Z0E3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
AireQ9Z0E3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AireQ9Z0E3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AireQ9Z0E3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
AireQ9Z0E3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AireQ9Z0E3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AireQ9Z0E3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.46■□□□□ 0.23
AireQ9Z0E3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AireQ9Z0E3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AireQ9Z0E3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AireQ9Z0E3 BC021767-201ENSMUST00000126387 1716 ntBASIC16.46■□□□□ 0.23
AireQ9Z0E3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
AireQ9Z0E3 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.46■□□□□ 0.23
AireQ9Z0E3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.46■□□□□ 0.23
AireQ9Z0E3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
AireQ9Z0E3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AireQ9Z0E3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
AireQ9Z0E3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
AireQ9Z0E3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
AireQ9Z0E3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AireQ9Z0E3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
AireQ9Z0E3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
AireQ9Z0E3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.46■□□□□ 0.22
AireQ9Z0E3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AireQ9Z0E3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AireQ9Z0E3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AireQ9Z0E3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
AireQ9Z0E3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.45■□□□□ 0.22
AireQ9Z0E3 Gm42778-201ENSMUST00000199644 553 ntBASIC16.45■□□□□ 0.22
AireQ9Z0E3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
AireQ9Z0E3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
AireQ9Z0E3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AireQ9Z0E3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
AireQ9Z0E3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
AireQ9Z0E3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
AireQ9Z0E3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AireQ9Z0E3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AireQ9Z0E3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AireQ9Z0E3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AireQ9Z0E3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
AireQ9Z0E3 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AireQ9Z0E3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AireQ9Z0E3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
AireQ9Z0E3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AireQ9Z0E3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AireQ9Z0E3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AireQ9Z0E3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AireQ9Z0E3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AireQ9Z0E3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AireQ9Z0E3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
AireQ9Z0E3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AireQ9Z0E3 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.43■□□□□ 0.22
AireQ9Z0E3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
AireQ9Z0E3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AireQ9Z0E3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
AireQ9Z0E3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
AireQ9Z0E3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
AireQ9Z0E3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
AireQ9Z0E3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AireQ9Z0E3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
AireQ9Z0E3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
AireQ9Z0E3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.43■□□□□ 0.22
AireQ9Z0E3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.43■□□□□ 0.22
AireQ9Z0E3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AireQ9Z0E3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
AireQ9Z0E3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
AireQ9Z0E3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AireQ9Z0E3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
AireQ9Z0E3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AireQ9Z0E3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.42■□□□□ 0.22
AireQ9Z0E3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.42■□□□□ 0.22
AireQ9Z0E3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.42■□□□□ 0.22
AireQ9Z0E3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AireQ9Z0E3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.42■□□□□ 0.22
AireQ9Z0E3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AireQ9Z0E3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AireQ9Z0E3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AireQ9Z0E3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
AireQ9Z0E3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms