Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ap4s1Q9WVL1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.7■□□□□ 0.42
Ap4s1Q9WVL1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
Ap4s1Q9WVL1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ap4s1Q9WVL1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ap4s1Q9WVL1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ap4s1Q9WVL1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ap4s1Q9WVL1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ap4s1Q9WVL1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ap4s1Q9WVL1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ap4s1Q9WVL1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ap4s1Q9WVL1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ap4s1Q9WVL1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ap4s1Q9WVL1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ap4s1Q9WVL1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Ap4s1Q9WVL1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ap4s1Q9WVL1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ap4s1Q9WVL1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ap4s1Q9WVL1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ap4s1Q9WVL1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ap4s1Q9WVL1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.69■□□□□ 0.42
Ap4s1Q9WVL1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ap4s1Q9WVL1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ap4s1Q9WVL1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ap4s1Q9WVL1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ap4s1Q9WVL1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ap4s1Q9WVL1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ap4s1Q9WVL1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ap4s1Q9WVL1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ap4s1Q9WVL1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ap4s1Q9WVL1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.69■□□□□ 0.42
Ap4s1Q9WVL1 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.69■□□□□ 0.42
Ap4s1Q9WVL1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ap4s1Q9WVL1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ap4s1Q9WVL1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ap4s1Q9WVL1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ap4s1Q9WVL1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ap4s1Q9WVL1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ap4s1Q9WVL1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.68■□□□□ 0.42
Ap4s1Q9WVL1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ap4s1Q9WVL1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.68■□□□□ 0.42
Ap4s1Q9WVL1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ap4s1Q9WVL1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ap4s1Q9WVL1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
Ap4s1Q9WVL1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ap4s1Q9WVL1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ap4s1Q9WVL1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ap4s1Q9WVL1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ap4s1Q9WVL1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ap4s1Q9WVL1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ap4s1Q9WVL1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ap4s1Q9WVL1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ap4s1Q9WVL1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.67■□□□□ 0.42
Ap4s1Q9WVL1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ap4s1Q9WVL1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ap4s1Q9WVL1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ap4s1Q9WVL1 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.67■□□□□ 0.42
Ap4s1Q9WVL1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ap4s1Q9WVL1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ap4s1Q9WVL1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ap4s1Q9WVL1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ap4s1Q9WVL1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ap4s1Q9WVL1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ap4s1Q9WVL1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ap4s1Q9WVL1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ap4s1Q9WVL1 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ap4s1Q9WVL1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ap4s1Q9WVL1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ap4s1Q9WVL1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ap4s1Q9WVL1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ap4s1Q9WVL1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ap4s1Q9WVL1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ap4s1Q9WVL1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ap4s1Q9WVL1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.66■□□□□ 0.42
Ap4s1Q9WVL1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ap4s1Q9WVL1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ap4s1Q9WVL1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ap4s1Q9WVL1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.66■□□□□ 0.42
Ap4s1Q9WVL1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ap4s1Q9WVL1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ap4s1Q9WVL1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ap4s1Q9WVL1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.66■□□□□ 0.42
Ap4s1Q9WVL1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ap4s1Q9WVL1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.65■□□□□ 0.42
Ap4s1Q9WVL1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ap4s1Q9WVL1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ap4s1Q9WVL1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ap4s1Q9WVL1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ap4s1Q9WVL1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ap4s1Q9WVL1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Ap4s1Q9WVL1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ap4s1Q9WVL1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ap4s1Q9WVL1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ap4s1Q9WVL1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.65■□□□□ 0.42
Ap4s1Q9WVL1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ap4s1Q9WVL1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Ap4s1Q9WVL1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
Ap4s1Q9WVL1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ap4s1Q9WVL1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.64■□□□□ 0.42
Ap4s1Q9WVL1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms