Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a2Q9JLR1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a2Q9JLR1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a2Q9JLR1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a2Q9JLR1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a2Q9JLR1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a2Q9JLR1 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sec61a2Q9JLR1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.59■□□□□ 0.25
Sec61a2Q9JLR1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.59■□□□□ 0.25
Sec61a2Q9JLR1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sec61a2Q9JLR1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sec61a2Q9JLR1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.59■□□□□ 0.25
Sec61a2Q9JLR1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sec61a2Q9JLR1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sec61a2Q9JLR1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sec61a2Q9JLR1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.59■□□□□ 0.25
Sec61a2Q9JLR1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Sec61a2Q9JLR1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.59■□□□□ 0.25
Sec61a2Q9JLR1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sec61a2Q9JLR1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sec61a2Q9JLR1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.59■□□□□ 0.25
Sec61a2Q9JLR1 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sec61a2Q9JLR1 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sec61a2Q9JLR1 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sec61a2Q9JLR1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sec61a2Q9JLR1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sec61a2Q9JLR1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sec61a2Q9JLR1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sec61a2Q9JLR1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.58■□□□□ 0.24
Sec61a2Q9JLR1 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sec61a2Q9JLR1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sec61a2Q9JLR1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sec61a2Q9JLR1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sec61a2Q9JLR1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sec61a2Q9JLR1 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sec61a2Q9JLR1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sec61a2Q9JLR1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Sec61a2Q9JLR1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sec61a2Q9JLR1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sec61a2Q9JLR1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sec61a2Q9JLR1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Sec61a2Q9JLR1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sec61a2Q9JLR1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sec61a2Q9JLR1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Sec61a2Q9JLR1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Sec61a2Q9JLR1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sec61a2Q9JLR1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sec61a2Q9JLR1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sec61a2Q9JLR1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Sec61a2Q9JLR1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Sec61a2Q9JLR1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sec61a2Q9JLR1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.57■□□□□ 0.24
Sec61a2Q9JLR1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.57■□□□□ 0.24
Sec61a2Q9JLR1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sec61a2Q9JLR1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Sec61a2Q9JLR1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sec61a2Q9JLR1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sec61a2Q9JLR1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sec61a2Q9JLR1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sec61a2Q9JLR1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sec61a2Q9JLR1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a2Q9JLR1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a2Q9JLR1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a2Q9JLR1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a2Q9JLR1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a2Q9JLR1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a2Q9JLR1 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a2Q9JLR1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a2Q9JLR1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a2Q9JLR1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Sec61a2Q9JLR1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Sec61a2Q9JLR1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a2Q9JLR1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a2Q9JLR1 Gm10849-201ENSMUST00000100397 618 ntBASIC16.56■□□□□ 0.24
Sec61a2Q9JLR1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a2Q9JLR1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a2Q9JLR1 Gm42778-201ENSMUST00000199644 553 ntBASIC16.56■□□□□ 0.24
Sec61a2Q9JLR1 Gm42569-201ENSMUST00000200539 472 ntBASIC16.56■□□□□ 0.24
Sec61a2Q9JLR1 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.56■□□□□ 0.24
Sec61a2Q9JLR1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Sec61a2Q9JLR1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a2Q9JLR1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a2Q9JLR1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a2Q9JLR1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a2Q9JLR1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a2Q9JLR1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a2Q9JLR1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a2Q9JLR1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a2Q9JLR1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a2Q9JLR1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a2Q9JLR1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a2Q9JLR1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a2Q9JLR1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a2Q9JLR1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a2Q9JLR1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a2Q9JLR1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Sec61a2Q9JLR1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a2Q9JLR1 Gm18671-201ENSMUST00000214826 683 ntBASIC16.55■□□□□ 0.24
Sec61a2Q9JLR1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a2Q9JLR1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms