Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Gm12918-201ENSMUST00000120234 636 ntBASIC17.26■□□□□ 0.35
Rtp4Q9ER80 Gm15710-201ENSMUST00000121821 636 ntBASIC17.26■□□□□ 0.35
Rtp4Q9ER80 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rtp4Q9ER80 Gm5075-201ENSMUST00000196916 622 ntBASIC17.26■□□□□ 0.35
Rtp4Q9ER80 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.26■□□□□ 0.35
Rtp4Q9ER80 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.26■□□□□ 0.35
Rtp4Q9ER80 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.26■□□□□ 0.35
Rtp4Q9ER80 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.26■□□□□ 0.35
Rtp4Q9ER80 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtp4Q9ER80 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtp4Q9ER80 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtp4Q9ER80 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rtp4Q9ER80 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtp4Q9ER80 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtp4Q9ER80 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rtp4Q9ER80 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.26■□□□□ 0.35
Rtp4Q9ER80 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.25■□□□□ 0.35
Rtp4Q9ER80 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Rtp4Q9ER80 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.25■□□□□ 0.35
Rtp4Q9ER80 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtp4Q9ER80 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtp4Q9ER80 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rtp4Q9ER80 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rtp4Q9ER80 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rtp4Q9ER80 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtp4Q9ER80 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtp4Q9ER80 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rtp4Q9ER80 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtp4Q9ER80 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.25■□□□□ 0.35
Rtp4Q9ER80 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtp4Q9ER80 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Rtp4Q9ER80 Gm10653-202ENSMUST00000139570 835 ntBASIC17.25■□□□□ 0.35
Rtp4Q9ER80 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtp4Q9ER80 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.25■□□□□ 0.35
Rtp4Q9ER80 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtp4Q9ER80 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtp4Q9ER80 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtp4Q9ER80 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.25■□□□□ 0.35
Rtp4Q9ER80 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Rtp4Q9ER80 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rtp4Q9ER80 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtp4Q9ER80 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rtp4Q9ER80 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtp4Q9ER80 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtp4Q9ER80 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtp4Q9ER80 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtp4Q9ER80 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.24■□□□□ 0.35
Rtp4Q9ER80 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
Rtp4Q9ER80 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtp4Q9ER80 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtp4Q9ER80 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtp4Q9ER80 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtp4Q9ER80 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtp4Q9ER80 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rtp4Q9ER80 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rtp4Q9ER80 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtp4Q9ER80 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtp4Q9ER80 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtp4Q9ER80 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtp4Q9ER80 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtp4Q9ER80 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtp4Q9ER80 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtp4Q9ER80 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtp4Q9ER80 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtp4Q9ER80 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtp4Q9ER80 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtp4Q9ER80 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtp4Q9ER80 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.23■□□□□ 0.35
Rtp4Q9ER80 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rtp4Q9ER80 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rtp4Q9ER80 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtp4Q9ER80 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rtp4Q9ER80 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rtp4Q9ER80 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtp4Q9ER80 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtp4Q9ER80 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.22■□□□□ 0.35
Rtp4Q9ER80 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtp4Q9ER80 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtp4Q9ER80 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Rtp4Q9ER80 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rtp4Q9ER80 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rtp4Q9ER80 Gm5408-201ENSMUST00000197998 747 ntBASIC17.22■□□□□ 0.35
Rtp4Q9ER80 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtp4Q9ER80 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtp4Q9ER80 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtp4Q9ER80 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Rtp4Q9ER80 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtp4Q9ER80 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtp4Q9ER80 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtp4Q9ER80 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtp4Q9ER80 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rtp4Q9ER80 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rtp4Q9ER80 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtp4Q9ER80 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtp4Q9ER80 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtp4Q9ER80 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtp4Q9ER80 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtp4Q9ER80 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Rtp4Q9ER80 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.21■□□□□ 0.35
Rtp4Q9ER80 Gm6211-202ENSMUST00000167849 925 ntBASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms