Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.3■□□□□ 0.68
Cpne8Q9DC53 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.3■□□□□ 0.68
Cpne8Q9DC53 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpne8Q9DC53 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.3■□□□□ 0.68
Cpne8Q9DC53 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.3■□□□□ 0.68
Cpne8Q9DC53 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpne8Q9DC53 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpne8Q9DC53 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpne8Q9DC53 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.29■□□□□ 0.68
Cpne8Q9DC53 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpne8Q9DC53 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpne8Q9DC53 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpne8Q9DC53 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpne8Q9DC53 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpne8Q9DC53 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpne8Q9DC53 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.29■□□□□ 0.68
Cpne8Q9DC53 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
Cpne8Q9DC53 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpne8Q9DC53 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpne8Q9DC53 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpne8Q9DC53 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Cpne8Q9DC53 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cpne8Q9DC53 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne8Q9DC53 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cpne8Q9DC53 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.28■□□□□ 0.68
Cpne8Q9DC53 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.28■□□□□ 0.68
Cpne8Q9DC53 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne8Q9DC53 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne8Q9DC53 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne8Q9DC53 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne8Q9DC53 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne8Q9DC53 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne8Q9DC53 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cpne8Q9DC53 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cpne8Q9DC53 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Cpne8Q9DC53 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.27■□□□□ 0.68
Cpne8Q9DC53 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cpne8Q9DC53 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cpne8Q9DC53 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.27■□□□□ 0.67
Cpne8Q9DC53 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cpne8Q9DC53 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cpne8Q9DC53 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cpne8Q9DC53 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Cpne8Q9DC53 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Cpne8Q9DC53 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.26■□□□□ 0.67
Cpne8Q9DC53 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cpne8Q9DC53 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpne8Q9DC53 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cpne8Q9DC53 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpne8Q9DC53 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.26■□□□□ 0.67
Cpne8Q9DC53 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpne8Q9DC53 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cpne8Q9DC53 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpne8Q9DC53 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne8Q9DC53 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne8Q9DC53 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cpne8Q9DC53 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne8Q9DC53 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne8Q9DC53 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Cpne8Q9DC53 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.25■□□□□ 0.67
Cpne8Q9DC53 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.25■□□□□ 0.67
Cpne8Q9DC53 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne8Q9DC53 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne8Q9DC53 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cpne8Q9DC53 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne8Q9DC53 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne8Q9DC53 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne8Q9DC53 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne8Q9DC53 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne8Q9DC53 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cpne8Q9DC53 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cpne8Q9DC53 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.24■□□□□ 0.67
Cpne8Q9DC53 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.24■□□□□ 0.67
Cpne8Q9DC53 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.24■□□□□ 0.67
Cpne8Q9DC53 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.24■□□□□ 0.67
Cpne8Q9DC53 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cpne8Q9DC53 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.24■□□□□ 0.67
Cpne8Q9DC53 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpne8Q9DC53 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpne8Q9DC53 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cpne8Q9DC53 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpne8Q9DC53 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.24■□□□□ 0.67
Cpne8Q9DC53 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpne8Q9DC53 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cpne8Q9DC53 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.23■□□□□ 0.67
Cpne8Q9DC53 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpne8Q9DC53 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpne8Q9DC53 Nespas-201ENSMUST00000143738 1083 ntBASIC19.23■□□□□ 0.67
Cpne8Q9DC53 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.23■□□□□ 0.67
Cpne8Q9DC53 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.23■□□□□ 0.67
Cpne8Q9DC53 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.23■□□□□ 0.67
Cpne8Q9DC53 Gm10493-201ENSMUST00000097270 612 ntBASIC19.23■□□□□ 0.67
Cpne8Q9DC53 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpne8Q9DC53 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpne8Q9DC53 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpne8Q9DC53 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpne8Q9DC53 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpne8Q9DC53 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpne8Q9DC53 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.22■□□□□ 0.67
Cpne8Q9DC53 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms