Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rrp8Q9DB85 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rrp8Q9DB85 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rrp8Q9DB85 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Rrp8Q9DB85 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rrp8Q9DB85 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rrp8Q9DB85 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rrp8Q9DB85 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Rrp8Q9DB85 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rrp8Q9DB85 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rrp8Q9DB85 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.09■□□□□ 0.49
Rrp8Q9DB85 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rrp8Q9DB85 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rrp8Q9DB85 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rrp8Q9DB85 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Rrp8Q9DB85 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rrp8Q9DB85 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rrp8Q9DB85 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rrp8Q9DB85 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Rrp8Q9DB85 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rrp8Q9DB85 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rrp8Q9DB85 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rrp8Q9DB85 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.08■□□□□ 0.48
Rrp8Q9DB85 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rrp8Q9DB85 Gm9987-201ENSMUST00000069768 567 ntBASIC18.08■□□□□ 0.48
Rrp8Q9DB85 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rrp8Q9DB85 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rrp8Q9DB85 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rrp8Q9DB85 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rrp8Q9DB85 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rrp8Q9DB85 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rrp8Q9DB85 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rrp8Q9DB85 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.07■□□□□ 0.48
Rrp8Q9DB85 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.07■□□□□ 0.48
Rrp8Q9DB85 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rrp8Q9DB85 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rrp8Q9DB85 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rrp8Q9DB85 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rrp8Q9DB85 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rrp8Q9DB85 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rrp8Q9DB85 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rrp8Q9DB85 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rrp8Q9DB85 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Rrp8Q9DB85 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rrp8Q9DB85 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rrp8Q9DB85 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Rrp8Q9DB85 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rrp8Q9DB85 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rrp8Q9DB85 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rrp8Q9DB85 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.06■□□□□ 0.48
Rrp8Q9DB85 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rrp8Q9DB85 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rrp8Q9DB85 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rrp8Q9DB85 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rrp8Q9DB85 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rrp8Q9DB85 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
Rrp8Q9DB85 Mir5122-201ENSMUST00000175004 89 ntBASIC18.06■□□□□ 0.48
Rrp8Q9DB85 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Rrp8Q9DB85 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rrp8Q9DB85 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rrp8Q9DB85 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rrp8Q9DB85 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rrp8Q9DB85 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rrp8Q9DB85 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rrp8Q9DB85 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rrp8Q9DB85 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rrp8Q9DB85 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rrp8Q9DB85 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.05■□□□□ 0.48
Rrp8Q9DB85 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rrp8Q9DB85 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rrp8Q9DB85 Gm5417-201ENSMUST00000079706 384 ntBASIC18.05■□□□□ 0.48
Rrp8Q9DB85 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rrp8Q9DB85 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rrp8Q9DB85 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rrp8Q9DB85 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rrp8Q9DB85 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rrp8Q9DB85 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rrp8Q9DB85 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.04■□□□□ 0.48
Rrp8Q9DB85 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Rrp8Q9DB85 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rrp8Q9DB85 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rrp8Q9DB85 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Rrp8Q9DB85 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rrp8Q9DB85 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rrp8Q9DB85 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rrp8Q9DB85 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rrp8Q9DB85 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rrp8Q9DB85 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rrp8Q9DB85 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rrp8Q9DB85 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rrp8Q9DB85 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rrp8Q9DB85 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rrp8Q9DB85 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rrp8Q9DB85 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rrp8Q9DB85 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rrp8Q9DB85 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rrp8Q9DB85 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rrp8Q9DB85 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rrp8Q9DB85 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Rrp8Q9DB85 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms