Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp2aQ9DB34 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Chmp2aQ9DB34 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp2aQ9DB34 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.26■□□□□ 0.67
Chmp2aQ9DB34 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.26■□□□□ 0.67
Chmp2aQ9DB34 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp2aQ9DB34 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Chmp2aQ9DB34 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp2aQ9DB34 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp2aQ9DB34 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Chmp2aQ9DB34 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp2aQ9DB34 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp2aQ9DB34 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
Chmp2aQ9DB34 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp2aQ9DB34 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Chmp2aQ9DB34 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp2aQ9DB34 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Chmp2aQ9DB34 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp2aQ9DB34 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp2aQ9DB34 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp2aQ9DB34 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp2aQ9DB34 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp2aQ9DB34 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp2aQ9DB34 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp2aQ9DB34 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Chmp2aQ9DB34 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp2aQ9DB34 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp2aQ9DB34 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp2aQ9DB34 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp2aQ9DB34 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp2aQ9DB34 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp2aQ9DB34 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp2aQ9DB34 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp2aQ9DB34 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp2aQ9DB34 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp2aQ9DB34 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Chmp2aQ9DB34 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Chmp2aQ9DB34 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp2aQ9DB34 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp2aQ9DB34 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp2aQ9DB34 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp2aQ9DB34 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp2aQ9DB34 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Chmp2aQ9DB34 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp2aQ9DB34 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp2aQ9DB34 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp2aQ9DB34 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp2aQ9DB34 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp2aQ9DB34 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.22■□□□□ 0.67
Chmp2aQ9DB34 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.22■□□□□ 0.67
Chmp2aQ9DB34 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp2aQ9DB34 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp2aQ9DB34 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Chmp2aQ9DB34 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp2aQ9DB34 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp2aQ9DB34 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp2aQ9DB34 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp2aQ9DB34 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp2aQ9DB34 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Chmp2aQ9DB34 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp2aQ9DB34 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Chmp2aQ9DB34 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.21■□□□□ 0.67
Chmp2aQ9DB34 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp2aQ9DB34 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.21■□□□□ 0.67
Chmp2aQ9DB34 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Chmp2aQ9DB34 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp2aQ9DB34 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Chmp2aQ9DB34 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp2aQ9DB34 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp2aQ9DB34 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp2aQ9DB34 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp2aQ9DB34 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp2aQ9DB34 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Chmp2aQ9DB34 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp2aQ9DB34 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp2aQ9DB34 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp2aQ9DB34 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp2aQ9DB34 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp2aQ9DB34 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Chmp2aQ9DB34 Mir5133-201ENSMUST00000174955 77 ntBASIC19.2■□□□□ 0.66
Chmp2aQ9DB34 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Chmp2aQ9DB34 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp2aQ9DB34 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp2aQ9DB34 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Chmp2aQ9DB34 Gm10602-201ENSMUST00000098239 609 ntBASIC19.2■□□□□ 0.66
Chmp2aQ9DB34 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.2■□□□□ 0.66
Chmp2aQ9DB34 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp2aQ9DB34 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp2aQ9DB34 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.19■□□□□ 0.66
Chmp2aQ9DB34 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Chmp2aQ9DB34 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp2aQ9DB34 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp2aQ9DB34 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Chmp2aQ9DB34 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp2aQ9DB34 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Chmp2aQ9DB34 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp2aQ9DB34 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp2aQ9DB34 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Chmp2aQ9DB34 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp2aQ9DB34 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms