Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nop56Q9D6Z1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nop56Q9D6Z1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nop56Q9D6Z1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Nop56Q9D6Z1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Nop56Q9D6Z1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nop56Q9D6Z1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nop56Q9D6Z1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.03■□□□□ 0.64
Nop56Q9D6Z1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nop56Q9D6Z1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Nop56Q9D6Z1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nop56Q9D6Z1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.03■□□□□ 0.64
Nop56Q9D6Z1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nop56Q9D6Z1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Nop56Q9D6Z1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nop56Q9D6Z1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nop56Q9D6Z1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nop56Q9D6Z1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nop56Q9D6Z1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nop56Q9D6Z1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
Nop56Q9D6Z1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Nop56Q9D6Z1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nop56Q9D6Z1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.02■□□□□ 0.64
Nop56Q9D6Z1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.02■□□□□ 0.64
Nop56Q9D6Z1 Golgb1-201ENSMUST00000023534 498 ntBASIC19.02■□□□□ 0.64
Nop56Q9D6Z1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nop56Q9D6Z1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nop56Q9D6Z1 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.02■□□□□ 0.63
Nop56Q9D6Z1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Nop56Q9D6Z1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.02■□□□□ 0.63
Nop56Q9D6Z1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nop56Q9D6Z1 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nop56Q9D6Z1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nop56Q9D6Z1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nop56Q9D6Z1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nop56Q9D6Z1 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nop56Q9D6Z1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nop56Q9D6Z1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Nop56Q9D6Z1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Nop56Q9D6Z1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19■□□□□ 0.63
Nop56Q9D6Z1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
Nop56Q9D6Z1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nop56Q9D6Z1 Gm9207-201ENSMUST00000198773 1115 ntBASIC19■□□□□ 0.63
Nop56Q9D6Z1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Nop56Q9D6Z1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nop56Q9D6Z1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nop56Q9D6Z1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nop56Q9D6Z1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Nop56Q9D6Z1 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nop56Q9D6Z1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nop56Q9D6Z1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Nop56Q9D6Z1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nop56Q9D6Z1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nop56Q9D6Z1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nop56Q9D6Z1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Nop56Q9D6Z1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Nop56Q9D6Z1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nop56Q9D6Z1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.99■□□□□ 0.63
Nop56Q9D6Z1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nop56Q9D6Z1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nop56Q9D6Z1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nop56Q9D6Z1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nop56Q9D6Z1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nop56Q9D6Z1 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nop56Q9D6Z1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nop56Q9D6Z1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nop56Q9D6Z1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nop56Q9D6Z1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nop56Q9D6Z1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nop56Q9D6Z1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nop56Q9D6Z1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nop56Q9D6Z1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nop56Q9D6Z1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nop56Q9D6Z1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nop56Q9D6Z1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Nop56Q9D6Z1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nop56Q9D6Z1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Nop56Q9D6Z1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nop56Q9D6Z1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nop56Q9D6Z1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nop56Q9D6Z1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nop56Q9D6Z1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nop56Q9D6Z1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Nop56Q9D6Z1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.97■□□□□ 0.63
Nop56Q9D6Z1 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nop56Q9D6Z1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nop56Q9D6Z1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nop56Q9D6Z1 Gm45102-201ENSMUST00000207427 857 ntBASIC18.97■□□□□ 0.63
Nop56Q9D6Z1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.97■□□□□ 0.63
Nop56Q9D6Z1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nop56Q9D6Z1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Nop56Q9D6Z1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.97■□□□□ 0.63
Nop56Q9D6Z1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nop56Q9D6Z1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nop56Q9D6Z1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nop56Q9D6Z1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nop56Q9D6Z1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Nop56Q9D6Z1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nop56Q9D6Z1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nop56Q9D6Z1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms