Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rtl8cQ9D6I0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtl8cQ9D6I0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtl8cQ9D6I0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.53■□□□□ 0.24
Rtl8cQ9D6I0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtl8cQ9D6I0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtl8cQ9D6I0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rtl8cQ9D6I0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtl8cQ9D6I0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtl8cQ9D6I0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtl8cQ9D6I0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtl8cQ9D6I0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtl8cQ9D6I0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Rtl8cQ9D6I0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtl8cQ9D6I0 Golph3-205ENSMUST00000228671 2842 ntBASIC16.52■□□□□ 0.24
Rtl8cQ9D6I0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtl8cQ9D6I0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtl8cQ9D6I0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtl8cQ9D6I0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtl8cQ9D6I0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.52■□□□□ 0.24
Rtl8cQ9D6I0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtl8cQ9D6I0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rtl8cQ9D6I0 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rtl8cQ9D6I0 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtl8cQ9D6I0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtl8cQ9D6I0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtl8cQ9D6I0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtl8cQ9D6I0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtl8cQ9D6I0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rtl8cQ9D6I0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtl8cQ9D6I0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Rtl8cQ9D6I0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtl8cQ9D6I0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtl8cQ9D6I0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rtl8cQ9D6I0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rtl8cQ9D6I0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtl8cQ9D6I0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Rtl8cQ9D6I0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtl8cQ9D6I0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.51■□□□□ 0.23
Rtl8cQ9D6I0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rtl8cQ9D6I0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtl8cQ9D6I0 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.51■□□□□ 0.23
Rtl8cQ9D6I0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtl8cQ9D6I0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Rtl8cQ9D6I0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtl8cQ9D6I0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtl8cQ9D6I0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtl8cQ9D6I0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtl8cQ9D6I0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Rtl8cQ9D6I0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtl8cQ9D6I0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtl8cQ9D6I0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.5■□□□□ 0.23
Rtl8cQ9D6I0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.5■□□□□ 0.23
Rtl8cQ9D6I0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtl8cQ9D6I0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rtl8cQ9D6I0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtl8cQ9D6I0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtl8cQ9D6I0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtl8cQ9D6I0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtl8cQ9D6I0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtl8cQ9D6I0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtl8cQ9D6I0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtl8cQ9D6I0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtl8cQ9D6I0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtl8cQ9D6I0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtl8cQ9D6I0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtl8cQ9D6I0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rtl8cQ9D6I0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.49■□□□□ 0.23
Rtl8cQ9D6I0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.49■□□□□ 0.23
Rtl8cQ9D6I0 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.49■□□□□ 0.23
Rtl8cQ9D6I0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rtl8cQ9D6I0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Rtl8cQ9D6I0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtl8cQ9D6I0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.49■□□□□ 0.23
Rtl8cQ9D6I0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtl8cQ9D6I0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Rtl8cQ9D6I0 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.49■□□□□ 0.23
Rtl8cQ9D6I0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtl8cQ9D6I0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Rtl8cQ9D6I0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtl8cQ9D6I0 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.48■□□□□ 0.23
Rtl8cQ9D6I0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtl8cQ9D6I0 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.48■□□□□ 0.23
Rtl8cQ9D6I0 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtl8cQ9D6I0 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.48■□□□□ 0.23
Rtl8cQ9D6I0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.48■□□□□ 0.23
Rtl8cQ9D6I0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Rtl8cQ9D6I0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rtl8cQ9D6I0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtl8cQ9D6I0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtl8cQ9D6I0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtl8cQ9D6I0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtl8cQ9D6I0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtl8cQ9D6I0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtl8cQ9D6I0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtl8cQ9D6I0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtl8cQ9D6I0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Rtl8cQ9D6I0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtl8cQ9D6I0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rtl8cQ9D6I0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms