Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a3Q9D554 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a3Q9D554 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.75■□□□□ 0.59
Sf3a3Q9D554 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a3Q9D554 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a3Q9D554 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a3Q9D554 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.75■□□□□ 0.59
Sf3a3Q9D554 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a3Q9D554 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a3Q9D554 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a3Q9D554 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a3Q9D554 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a3Q9D554 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
Sf3a3Q9D554 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sf3a3Q9D554 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Sf3a3Q9D554 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sf3a3Q9D554 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sf3a3Q9D554 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.74■□□□□ 0.59
Sf3a3Q9D554 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Sf3a3Q9D554 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sf3a3Q9D554 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sf3a3Q9D554 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.74■□□□□ 0.59
Sf3a3Q9D554 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.74■□□□□ 0.59
Sf3a3Q9D554 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Sf3a3Q9D554 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Sf3a3Q9D554 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sf3a3Q9D554 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.74■□□□□ 0.59
Sf3a3Q9D554 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.74■□□□□ 0.59
Sf3a3Q9D554 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sf3a3Q9D554 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
Sf3a3Q9D554 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sf3a3Q9D554 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sf3a3Q9D554 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sf3a3Q9D554 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sf3a3Q9D554 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sf3a3Q9D554 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sf3a3Q9D554 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sf3a3Q9D554 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.73■□□□□ 0.59
Sf3a3Q9D554 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Sf3a3Q9D554 Gm40881-201ENSMUST00000223397 166 ntBASIC18.73■□□□□ 0.59
Sf3a3Q9D554 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.73■□□□□ 0.59
Sf3a3Q9D554 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Sf3a3Q9D554 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sf3a3Q9D554 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Sf3a3Q9D554 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sf3a3Q9D554 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sf3a3Q9D554 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.73■□□□□ 0.59
Sf3a3Q9D554 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sf3a3Q9D554 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sf3a3Q9D554 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sf3a3Q9D554 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sf3a3Q9D554 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Sf3a3Q9D554 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Sf3a3Q9D554 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sf3a3Q9D554 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sf3a3Q9D554 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Sf3a3Q9D554 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Sf3a3Q9D554 Gm43566-201ENSMUST00000196851 808 ntBASIC18.72■□□□□ 0.59
Sf3a3Q9D554 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sf3a3Q9D554 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sf3a3Q9D554 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sf3a3Q9D554 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sf3a3Q9D554 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sf3a3Q9D554 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sf3a3Q9D554 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Sf3a3Q9D554 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Sf3a3Q9D554 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.71■□□□□ 0.59
Sf3a3Q9D554 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sf3a3Q9D554 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sf3a3Q9D554 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.71■□□□□ 0.59
Sf3a3Q9D554 Mir6538-201ENSMUST00000183713 110 ntBASIC18.71■□□□□ 0.59
Sf3a3Q9D554 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.71■□□□□ 0.59
Sf3a3Q9D554 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sf3a3Q9D554 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sf3a3Q9D554 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sf3a3Q9D554 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.71■□□□□ 0.59
Sf3a3Q9D554 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.71■□□□□ 0.58
Sf3a3Q9D554 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Sf3a3Q9D554 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Sf3a3Q9D554 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Sf3a3Q9D554 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3a3Q9D554 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3a3Q9D554 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.7■□□□□ 0.58
Sf3a3Q9D554 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Sf3a3Q9D554 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3a3Q9D554 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3a3Q9D554 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.7■□□□□ 0.58
Sf3a3Q9D554 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3a3Q9D554 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Sf3a3Q9D554 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3a3Q9D554 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.7■□□□□ 0.58
Sf3a3Q9D554 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3a3Q9D554 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3a3Q9D554 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.7■□□□□ 0.58
Sf3a3Q9D554 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.7■□□□□ 0.58
Sf3a3Q9D554 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Sf3a3Q9D554 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Sf3a3Q9D554 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3a3Q9D554 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3a3Q9D554 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms