Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vps33aQ9D2N9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vps33aQ9D2N9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vps33aQ9D2N9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.58■□□□□ 0.72
Vps33aQ9D2N9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.58■□□□□ 0.72
Vps33aQ9D2N9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.58■□□□□ 0.72
Vps33aQ9D2N9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vps33aQ9D2N9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vps33aQ9D2N9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vps33aQ9D2N9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vps33aQ9D2N9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Vps33aQ9D2N9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.57■□□□□ 0.72
Vps33aQ9D2N9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Vps33aQ9D2N9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
Vps33aQ9D2N9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps33aQ9D2N9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Vps33aQ9D2N9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps33aQ9D2N9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps33aQ9D2N9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.57■□□□□ 0.72
Vps33aQ9D2N9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps33aQ9D2N9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Vps33aQ9D2N9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps33aQ9D2N9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps33aQ9D2N9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Vps33aQ9D2N9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Vps33aQ9D2N9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps33aQ9D2N9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.56■□□□□ 0.72
Vps33aQ9D2N9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps33aQ9D2N9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Vps33aQ9D2N9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Vps33aQ9D2N9 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.56■□□□□ 0.72
Vps33aQ9D2N9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps33aQ9D2N9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps33aQ9D2N9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Vps33aQ9D2N9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Vps33aQ9D2N9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps33aQ9D2N9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps33aQ9D2N9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Vps33aQ9D2N9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps33aQ9D2N9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps33aQ9D2N9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps33aQ9D2N9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps33aQ9D2N9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps33aQ9D2N9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps33aQ9D2N9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps33aQ9D2N9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps33aQ9D2N9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps33aQ9D2N9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vps33aQ9D2N9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps33aQ9D2N9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Vps33aQ9D2N9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps33aQ9D2N9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps33aQ9D2N9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps33aQ9D2N9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps33aQ9D2N9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps33aQ9D2N9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Vps33aQ9D2N9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Vps33aQ9D2N9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.54■□□□□ 0.72
Vps33aQ9D2N9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps33aQ9D2N9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps33aQ9D2N9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps33aQ9D2N9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Vps33aQ9D2N9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps33aQ9D2N9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps33aQ9D2N9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps33aQ9D2N9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps33aQ9D2N9 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.53■□□□□ 0.72
Vps33aQ9D2N9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.53■□□□□ 0.72
Vps33aQ9D2N9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Vps33aQ9D2N9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps33aQ9D2N9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.53■□□□□ 0.72
Vps33aQ9D2N9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps33aQ9D2N9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Vps33aQ9D2N9 Serp2-204ENSMUST00000228055 705 ntBASIC19.53■□□□□ 0.72
Vps33aQ9D2N9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps33aQ9D2N9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps33aQ9D2N9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps33aQ9D2N9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps33aQ9D2N9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps33aQ9D2N9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vps33aQ9D2N9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps33aQ9D2N9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps33aQ9D2N9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps33aQ9D2N9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.52■□□□□ 0.72
Vps33aQ9D2N9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.52■□□□□ 0.72
Vps33aQ9D2N9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.52■□□□□ 0.72
Vps33aQ9D2N9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps33aQ9D2N9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Vps33aQ9D2N9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.52■□□□□ 0.72
Vps33aQ9D2N9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.52■□□□□ 0.72
Vps33aQ9D2N9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vps33aQ9D2N9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vps33aQ9D2N9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Vps33aQ9D2N9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.51■□□□□ 0.71
Vps33aQ9D2N9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vps33aQ9D2N9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Vps33aQ9D2N9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps33aQ9D2N9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vps33aQ9D2N9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Vps33aQ9D2N9 Etf1-202ENSMUST00000180351 108 ntBASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms